KRT78 ORF clone pFN21AB7246

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7246

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Clone info.

Species

human

Clone Name

pFN21AB7246 Sequence (with vector) Restriction Map

Product ID

FHC02352

Flexi Clone PID

FXC02352

ORF Sequence

DNA sequence (1560 bp)
Protein sequence (520 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463817]

Gene

KIBB7246

Symbol

KRT78

Alias : CK-78, K5B, K78, Kb40

Description

keratin 78, type II, transcript variant 1

Original Clone ID

oc00462

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1560 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 520 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8840.1 7.3e-111 100.0 KRT78 CCDS73473.1 6.2e-81 100.0 KRT78 CCDS41787.2 1.6e-51 55.3 KRT4 CCDS41786.1 9e-51 53.1 KRT6A CCDS8829.1 1.6e-50 52.9 KRT6C The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003054 113 121 PR01276 Type II keratin IPR003054 140 152 PR01276 Type II keratin IPR003054 187 200 PR01276 Type II keratin IPR003054 201 220 PR01276 Type II keratin IPR003054 312 329 PR01276 Type II keratin IPR003054 363 378 PR01276 Type II keratin HMMPfam IPR016044 110 423 PF00038 Filament
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_775487 520 611159 100.0 100.0 XP_011536312 488 611159 93.8 100.0 NP_002263 520 123940,193900 55.3 93.5 NP_005545 564 148041,615726 53.1 97.5 NP_775109 564 612315,615735 52.9 97.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7246 Download

>KIBB7246  1560 bp
ATGTCTCTCTCCCCATGCCGGGCCCAGAGGGGCTTCAGCGCTCGCTCAGCCTGTTCTGCT
CGCTCAAGGGGCCGCAGCAGGGGAGGCTTCAGCAGCAGGGGCGGCTTCAGCAGCAGGAGC
CTTAATTCCTTTGGGGGGTGCCTGGAAGGCTCTCGTGGGAGTACCTGGGGGTCAGGGGGT
AGGCTGGGGGTGCGGTTTGGGGAGTGGAGTGGTGGGCCTGGGCTCTCCCTGTGCCCTCCG
GGGGGCATCCAAGAAGTGACCATCAACCAGAATCTGCTGACCCCACTGAAGATTGAGATC
GATCCCCAGTTCCAGGTGGTGCGGACGCAGGAGACCCAGGAGATCAGAACCCTCAACAAC
CAGTTTGCTTCCTTCATTGACAAGGTGCGGTTCCTGGAGCAGCAGAACAAGGTCCTGGAG
ACGAAGTGGCATCTGCTGCAGCAACAGGGGTTGAGTGGCAGCCAGCAGGGCCTGGAGCCT
GTCTTTGAGGCCTGCCTGGATCAGCTCAGGAAGCAGCTGGAGCAGCTCCAGGGAGAACGA
GGGGCTCTGGATGCTGAGTTGAAGGCCTGCCGGGACCAGGAGGAGGAGTATAAGTCCAAG
TATGAGGAGGAGGCCCACAGGCGTGCCACACTTGAGAACGACTTTGTGGTCCTCAAGAAG
GATGTGGATGGGGTTTTCCTGAGCAAGATGGAGTTGGAGGGCAAGCTGGAGGCTCTGAGA
GAGTACCTCTACTTCTTGAAGCATCTGAATGAAGAAGAGCTGGGCCAGCTCCAGACCCAG
GCCAGCGACACGTCTGTGGTGCTGTCCATGGACAACAACCGCTACCTGGACTTCAGCAGC
ATCATCACTGAGGTCCGCGCCCGGTACGAGGAGATCGCCCGGAGCAGCAAGGCTGAGGCT
GAGGCCTTGTACCAGACCAAGTACCAGGAACTTCAGGTGTCTGCCCAGCTTCATGGGGAC
AGGATGCAGGAAACGAAAGTCCAGATCTCTCAGCTACACCAAGAGATTCAGAGGCTGCAG
AGTCAGACTGAGAACCTCAAGAAGCAGAACGCCAGCCTGCAGGCCGCCATCACTGATGCT
GAGCAGCGTGGGGAGCTGGCCCTCAAGGACGCTCAGGCCAAGGTGGACGAGCTGGAGGCT
GCTCTGAGGATGGCCAAGCAGAACCTGGCCCGGCTGCTGTGCGAGTACCAGGAGCTGACG
AGCACGAAGCTTTCCCTGGATGTGGAGATTGCCACTTACCGCAGGCTGCTGGAGGGCGAG
GAGTGCAGGATGTCTGGGGAGTGCACCAGCCAGGTCACTATCTCCTCGGTGGGAGGCAGC
GCTGTCATGTCTGGAGGAGTTGGTGGAGGCTTGGGGAGCACTTGTGGACTCGGTAGTGGG
AAAGGCAGCCCTGGGTCCTGCTGCACCAGCATTGTGACTGGAGGCTCCAACATCATTCTG
GGCTCTGGGAAGGACCCTGTTTTGGATTCCTGCTCTGTGTCTGGCTCCAGCGCTGGCTCC
AGCTGCCACACCATCCTGAAGAAGACAGTTGAGTCGAGTCTGAAGACATCCATCACCTAC

ORF Protein

Cloned ORF protein sequence for pFN21AB7246 Download

>KIBB7246  520 aa
MSLSPCRAQRGFSARSACSARSRGRSRGGFSSRGGFSSRSLNSFGGCLEGSRGSTWGSGG
RLGVRFGEWSGGPGLSLCPPGGIQEVTINQNLLTPLKIEIDPQFQVVRTQETQEIRTLNN
QFASFIDKVRFLEQQNKVLETKWHLLQQQGLSGSQQGLEPVFEACLDQLRKQLEQLQGER
GALDAELKACRDQEEEYKSKYEEEAHRRATLENDFVVLKKDVDGVFLSKMELEGKLEALR
EYLYFLKHLNEEELGQLQTQASDTSVVLSMDNNRYLDFSSIITEVRARYEEIARSSKAEA
EALYQTKYQELQVSAQLHGDRMQETKVQISQLHQEIQRLQSQTENLKKQNASLQAAITDA
EQRGELALKDAQAKVDELEAALRMAKQNLARLLCEYQELTSTKLSLDVEIATYRRLLEGE
ECRMSGECTSQVTISSVGGSAVMSGGVGGGLGSTCGLGSGKGSPGSCCTSIVTGGSNIIL
GSGKDPVLDSCSVSGSSAGSSCHTILKKTVESSLKTSITY

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7246 Download

>pFN21AB7246  6265 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCTCTCTCCCCATGCCGGGCCCAGAGGGGCTT
CAGCGCTCGCTCAGCCTGTTCTGCTCGCTCAAGGGGCCGCAGCAGGGGAGGCTTCAGCAG
CAGGGGCGGCTTCAGCAGCAGGAGCCTTAATTCCTTTGGGGGGTGCCTGGAAGGCTCTCG
TGGGAGTACCTGGGGGTCAGGGGGTAGGCTGGGGGTGCGGTTTGGGGAGTGGAGTGGTGG
GCCTGGGCTCTCCCTGTGCCCTCCGGGGGGCATCCAAGAAGTGACCATCAACCAGAATCT
GCTGACCCCACTGAAGATTGAGATCGATCCCCAGTTCCAGGTGGTGCGGACGCAGGAGAC
CCAGGAGATCAGAACCCTCAACAACCAGTTTGCTTCCTTCATTGACAAGGTGCGGTTCCT
GGAGCAGCAGAACAAGGTCCTGGAGACGAAGTGGCATCTGCTGCAGCAACAGGGGTTGAG
TGGCAGCCAGCAGGGCCTGGAGCCTGTCTTTGAGGCCTGCCTGGATCAGCTCAGGAAGCA
GCTGGAGCAGCTCCAGGGAGAACGAGGGGCTCTGGATGCTGAGTTGAAGGCCTGCCGGGA
CCAGGAGGAGGAGTATAAGTCCAAGTATGAGGAGGAGGCCCACAGGCGTGCCACACTTGA
GAACGACTTTGTGGTCCTCAAGAAGGATGTGGATGGGGTTTTCCTGAGCAAGATGGAGTT
GGAGGGCAAGCTGGAGGCTCTGAGAGAGTACCTCTACTTCTTGAAGCATCTGAATGAAGA
AGAGCTGGGCCAGCTCCAGACCCAGGCCAGCGACACGTCTGTGGTGCTGTCCATGGACAA
CAACCGCTACCTGGACTTCAGCAGCATCATCACTGAGGTCCGCGCCCGGTACGAGGAGAT
CGCCCGGAGCAGCAAGGCTGAGGCTGAGGCCTTGTACCAGACCAAGTACCAGGAACTTCA
GGTGTCTGCCCAGCTTCATGGGGACAGGATGCAGGAAACGAAAGTCCAGATCTCTCAGCT
ACACCAAGAGATTCAGAGGCTGCAGAGTCAGACTGAGAACCTCAAGAAGCAGAACGCCAG
CCTGCAGGCCGCCATCACTGATGCTGAGCAGCGTGGGGAGCTGGCCCTCAAGGACGCTCA
GGCCAAGGTGGACGAGCTGGAGGCTGCTCTGAGGATGGCCAAGCAGAACCTGGCCCGGCT
GCTGTGCGAGTACCAGGAGCTGACGAGCACGAAGCTTTCCCTGGATGTGGAGATTGCCAC
TTACCGCAGGCTGCTGGAGGGCGAGGAGTGCAGGATGTCTGGGGAGTGCACCAGCCAGGT
CACTATCTCCTCGGTGGGAGGCAGCGCTGTCATGTCTGGAGGAGTTGGTGGAGGCTTGGG
GAGCACTTGTGGACTCGGTAGTGGGAAAGGCAGCCCTGGGTCCTGCTGCACCAGCATTGT
GACTGGAGGCTCCAACATCATTCTGGGCTCTGGGAAGGACCCTGTTTTGGATTCCTGCTC
TGTGTCTGGCTCCAGCGCTGGCTCCAGCTGCCACACCATCCTGAAGAAGACAGTTGAGTC
GAGTCTGAAGACATCCATCACCTACGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCC
TCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAG
CTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTT
CGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGA
AAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGC
TGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAG
ATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAA
TGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATC
CGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGT
GGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGG
AAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGC
CTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG
GGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTT
CGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTA
TTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAAT
GACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGA
GAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACA
ACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACT
CGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACC
ACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACT
CTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTT
CTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGT
GGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTT
ATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATA
GGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGG
TATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAA
AGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGG
CGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGA
GGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCG
TGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGG
GAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTC
GCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCG
GTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCA
CTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGT
GGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAG
TTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCG
GTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATC
CTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTT
TGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAG
GAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAG
TGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTA
AAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTC
TGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAA
ATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATG
CGTCCGGCGTAGAGGATCGAGATCT