PAX7 ORF clone pFN21AB7796

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7796

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AB7796 Sequence (with vector) Restriction Map

Product ID

FHC20120

ORF Sequence

DNA sequence (1554 bp)
Protein sequence (518 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB7796

Symbol

PAX7

Alias : HUP1, MYOSCO, PAX7B, RMS2

Description

paired box 7, transcript variant 2

Original Clone ID

cs00296

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1554 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 518 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS44075.1 1.8e-119 100.0 PAX7 CCDS186.1 5.5e-119 99.6 PAX7 CCDS44074.1 4.5e-106 99.4 PAX7 CCDS42826.1 1.6e-83 77.3 PAX3 CCDS42825.1 3.6e-83 77.8 PAX3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001523 38 53 PR00027 Paired box protein IPR001523 56 74 PR00027 Paired box protein IPR001523 76 93 PR00027 Paired box protein IPR001523 94 111 PR00027 Paired box protein HMMPfam IPR001523 34 159 PF00292 Paired box protein IPR001356 216 272 PF00046 Homeobox IPR022106 343 383 PF12360 Paired box protein 7 HMMSmart IPR001523 34 159 SM00351 Paired box protein IPR001356 215 277 SM00389 Homeobox ProfileScan IPR001523 34 161 PS51057 Paired box protein IPR001356 213 273 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_039236 518 167410,268220 100.0 100.0 NP_002575 520 167410,268220 99.6 100.0 NP_001128726 505 167410,268220 99.4 90.0 NP_852122 479 122880,148820,193500,268220,606597 77.3 91.1 NP_852123 484 122880,148820,193500,268220,606597 77.8 90.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7796 Download

>KIBB7796  1554 bp
ATGGCGGCCCTTCCCGGCACGGTACCGAGAATGATGCGGCCGGCTCCGGGGCAGAACTAC
CCCCGCACGGGATTCCCTTTGGAAGTGTCCACCCCGCTTGGCCAAGGCCGGGTCAATCAG
CTGGGAGGGGTCTTCATCAATGGGCGACCCCTGCCTAACCACATCCGCCACAAGATAGTG
GAGATGGCCCACCATGGCATCCGGCCCTGTGTCATCTCCCGACAGCTGCGTGTCTCCCAC
GGCTGCGTCTCCAAGATTCTTTGCCGCTACCAGGAGACCGGGTCCATCCGGCCTGGGGCC
ATCGGCGGCAGCAAGCCCAGACAGGTGGCGACTCCGGATGTAGAGAAAAAGATTGAGGAG
TACAAGAGGGAAAACCCAGGCATGTTCAGCTGGGAGATCCGGGACAGGCTGCTGAAGGAT
GGGCACTGTGACCGAAGCACTGTGCCCTCAGTGAGTTCGATTAGCCGCGTGCTCAGAATC
AAGTTCGGGAAGAAAGAGGAGGAGGATGAAGCGGACAAGAAGGAGGACGACGGCGAAAAG
AAGGCCAAACACAGCATCGACGGCATCCTGGGCGACAAAGGGAACCGGCTGGACGAGGGC
TCGGATGTGGAGTCGGAACCTGACCTCCCACTGAAGCGCAAGCAGCGACGCAGTCGGACC
ACATTCACGGCCGAGCAGCTGGAGGAGCTGGAGAAGGCCTTTGAGAGGACCCACTACCCA
GACATATACACCCGCGAGGAGCTGGCGCAGAGGACCAAGCTGACAGAGGCGCGTGTGCAG
GTCTGGTTCAGTAACCGCCGCGCCCGTTGGCGTAAGCAGGCAGGAGCCAACCAGCTGGCG
GCGTTCAACCACCTTCTGCCAGGAGGCTTCCCACCCACCGGCATGCCCACGCTGCCCCCC
TACCAGCTGCCGGACTCCACCTACCCCACCACCACCATCTCCCAAGATGGGGGCAGCACT
GTGCACCGGCCTCAGCCCCTGCCACCGTCCACCATGCACCAGGGCGGGCTGGCTGCAGCG
GCTGCAGCCGCCGACACCAGCTCTGCCTACGGAGCCCGCCACAGCTTCTCCAGCTACTCT
GACAGCTTCATGAATCCGGCGGCGCCCTCCAACCACATGAACCCGGTCAGCAACGGCCTG
TCTCCTCAGGTGATGAGCATCTTGGGCAACCCCAGTGCGGTGCCCCCGCAGCCACAGGCT
GACTTCTCCATCTCCCCGCTGCATGGCGGCCTGGACTCGGCCACCTCCATCTCAGCCAGC
TGCAGCCAGCGGGCCGACTCCATCAAGCCAGGAGACAGCCTGCCCACCTCCCAGGCCTAC
TGCCCACCCACCTACAGCACCACCGGCTACAGCGTGGACCCCGTGGCCGGCTATCAGTAC
GGCCAGTACGGCCAGAGTGAGTGCCTGGTGCCCTGGGCGTCCCCCGTCCCCATTCCTTCT
CCCACCCCCAGGGCCTCCTGCTTGTTTATGGAGAGCTACAAGGTGGTGTCAGGGTGGGGA
ATGTCCATTTCACAGATGGAAAAATTGAAGTCCAGCCAGATGGAACAGTTCACC

ORF Protein

Cloned ORF protein sequence for pFN21AB7796 Download

>KIBB7796  518 aa
MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
YKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEEEDEADKKEDDGEK
KAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYP
DIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTLPP
YQLPDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAYGARHSFSSYS
DSFMNPAAPSNHMNPVSNGLSPQVMSILGNPSAVPPQPQADFSISPLHGGLDSATSISAS
CSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQSECLVPWASPVPIPS
PTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7796 Download

>pFN21AB7796  6259 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGCCCTTCCCGGCACGGTACCGAGAATGAT
GCGGCCGGCTCCGGGGCAGAACTACCCCCGCACGGGATTCCCTTTGGAAGTGTCCACCCC
GCTTGGCCAAGGCCGGGTCAATCAGCTGGGAGGGGTCTTCATCAATGGGCGACCCCTGCC
TAACCACATCCGCCACAAGATAGTGGAGATGGCCCACCATGGCATCCGGCCCTGTGTCAT
CTCCCGACAGCTGCGTGTCTCCCACGGCTGCGTCTCCAAGATTCTTTGCCGCTACCAGGA
GACCGGGTCCATCCGGCCTGGGGCCATCGGCGGCAGCAAGCCCAGACAGGTGGCGACTCC
GGATGTAGAGAAAAAGATTGAGGAGTACAAGAGGGAAAACCCAGGCATGTTCAGCTGGGA
GATCCGGGACAGGCTGCTGAAGGATGGGCACTGTGACCGAAGCACTGTGCCCTCAGTGAG
TTCGATTAGCCGCGTGCTCAGAATCAAGTTCGGGAAGAAAGAGGAGGAGGATGAAGCGGA
CAAGAAGGAGGACGACGGCGAAAAGAAGGCCAAACACAGCATCGACGGCATCCTGGGCGA
CAAAGGGAACCGGCTGGACGAGGGCTCGGATGTGGAGTCGGAACCTGACCTCCCACTGAA
GCGCAAGCAGCGACGCAGTCGGACCACATTCACGGCCGAGCAGCTGGAGGAGCTGGAGAA
GGCCTTTGAGAGGACCCACTACCCAGACATATACACCCGCGAGGAGCTGGCGCAGAGGAC
CAAGCTGACAGAGGCGCGTGTGCAGGTCTGGTTCAGTAACCGCCGCGCCCGTTGGCGTAA
GCAGGCAGGAGCCAACCAGCTGGCGGCGTTCAACCACCTTCTGCCAGGAGGCTTCCCACC
CACCGGCATGCCCACGCTGCCCCCCTACCAGCTGCCGGACTCCACCTACCCCACCACCAC
CATCTCCCAAGATGGGGGCAGCACTGTGCACCGGCCTCAGCCCCTGCCACCGTCCACCAT
GCACCAGGGCGGGCTGGCTGCAGCGGCTGCAGCCGCCGACACCAGCTCTGCCTACGGAGC
CCGCCACAGCTTCTCCAGCTACTCTGACAGCTTCATGAATCCGGCGGCGCCCTCCAACCA
CATGAACCCGGTCAGCAACGGCCTGTCTCCTCAGGTGATGAGCATCTTGGGCAACCCCAG
TGCGGTGCCCCCGCAGCCACAGGCTGACTTCTCCATCTCCCCGCTGCATGGCGGCCTGGA
CTCGGCCACCTCCATCTCAGCCAGCTGCAGCCAGCGGGCCGACTCCATCAAGCCAGGAGA
CAGCCTGCCCACCTCCCAGGCCTACTGCCCACCCACCTACAGCACCACCGGCTACAGCGT
GGACCCCGTGGCCGGCTATCAGTACGGCCAGTACGGCCAGAGTGAGTGCCTGGTGCCCTG
GGCGTCCCCCGTCCCCATTCCTTCTCCCACCCCCAGGGCCTCCTGCTTGTTTATGGAGAG
CTACAAGGTGGTGTCAGGGTGGGGAATGTCCATTTCACAGATGGAAAAATTGAAGTCCAG
CCAGATGGAACAGTTCACCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT