ZKSCAN8 ORF clone pFN21AB7881

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7881

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Clone info.

Species

human

Clone Name

pFN21AB7881 Sequence (with vector) Restriction Map

Product ID

FHC12657

ORF Sequence

DNA sequence (1734 bp)
Protein sequence (578 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB7881

Symbol

ZKSCAN8

Alias : LD5-1, ZNF192, ZSCAN40

Description

zinc finger with KRAB and SCAN domains 8, transcript variant 2

Original Clone ID

cs00381

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1734 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 578 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4645.1 4.2e-140 100.0 ZKSCAN8 CCDS4650.1 1.1e-53 46.9 ZKSCAN3 CCDS4647.1 3.4e-51 45.6 ZKSCAN4 CCDS45852.1 2.5e-42 50.5 ZNF397 CCDS12208.1 8.2e-42 49.9 ZNF558 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 47 134 PF02023 Transcription regulator SCAN IPR001909 222 259 PF01352 Krueppel-associated box IPR007087 322 344 PF00096 Zinc finger IPR007087 350 372 PF00096 Zinc finger IPR007087 406 428 PF00096 Zinc finger IPR007087 434 456 PF00096 Zinc finger IPR007087 462 484 PF00096 Zinc finger IPR007087 490 512 PF00096 Zinc finger IPR007087 546 568 PF00096 Zinc finger HMMSmart IPR003309 47 159 SM00431 Transcription regulator SCAN IPR001909 220 279 SM00349 Krueppel-associated box IPR015880 322 344 SM00355 Zinc finger IPR015880 350 372 SM00355 Zinc finger IPR015880 378 400 SM00355 Zinc finger IPR015880 406 428 SM00355 Zinc finger IPR015880 434 456 SM00355 Zinc finger IPR015880 462 484 SM00355 Zinc finger IPR015880 490 512 SM00355 Zinc finger IPR015880 518 540 SM00355 Zinc finger IPR015880 546 568 SM00355 Zinc finger ProfileScan IPR003309 51 133 PS50804 Transcription regulator SCAN IPR001909 220 316 PS50805 Krueppel-associated box IPR007087 322 349 PS50157 Zinc finger IPR007087 350 377 PS50157 Zinc finger IPR007087 378 405 PS50157 Zinc finger IPR007087 406 433 PS50157 Zinc finger IPR007087 434 461 PS50157 Zinc finger IPR007087 462 489 PS50157 Zinc finger IPR007087 490 517 PS50157 Zinc finger IPR007087 518 545 PS50157 Zinc finger IPR007087 546 573 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011513172 578 602240 100.0 100.0 XP_016866755 578 602240 100.0 100.0 NP_001265048 578 602240 100.0 100.0 NP_006289 578 602240 100.0 100.0 XP_006715278 538 612791 46.9 93.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7881 Download

>KIBB7881  1734 bp
ATGGCTGAAGAATCAAGAAAGCCTTCAGCCCCATCCCCACCAGACCAGACTCCTGAAGAG
GATCTTGTAATCGTCAAGGTAGAGGAGGATCATGGTTGGGACCAGGAATCTAGTCTGCAT
GAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCTGCGCTTCAGGCAGTTACGCTACCAG
GAGACACTAGGACCCCGAGAAGCTCTGATCCAACTACGGGCCCTTTGCCATCAGTGGCTG
AGGCCAGATTTGAACACCAAGGAACAGATCCTGGAGCTGCTGGTGCTGGAGCAGTTCTTG
ACCATCCTACCTGAGGAGCTCCAGACACTGGTTAAGGAACATCAGCTAGAGAACGGAGAG
GAGGTGGTGACCCTATTAGAGGATTTGGAAAGGCAGATTGATATACTAGGACGACCAGTC
TCAGCTCGCGTACATGGACATAGGGTACTCTGGGAGGAGGTAGTACATTCAGCATCTGCA
CCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGCCC
CAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGA
AGTTCTGGAGACCAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAGACTTTGGAG
AAGATTGAAGACATGGCTGTGTCCCTTATTCGAGAGGAGTGGCTTCTTGATCCATCACAG
AAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAGAAACATGTTCTCCCTGGGTGGT
GAGACCAGGAGTGAGAACAGGGAATTAGCTTCAAAACAGGTAATATCTACTGGAATCCAG
CCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAA
GAAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGCGGGGAAATCCCACACAAGAGAGA
CGACATAAATGTGATGAATGTGGGAAAAGCTTTGCTCAGAGCTCAGGCCTTGTTCGCCAC
TGGAGAATCCACACTGGGGAGAAACCCTATCAGTGTAATGTGTGTGGTAAAGCCTTCAGT
TACAGGTCAGCCCTTCTTTCACATCAGGATATCCACAACAAAGTAAAACGCTATCACTGT
AAGGAGTGTGGCAAAGCCTTCAGTCAGAACACAGGCCTGATTCTGCACCAGAGAATCCAC
ACTGGGGAGAAGCCATATCAGTGCAATCAGTGTGGGAAGGCTTTCAGTCAGAGTGCGGGC
CTTATTCTGCACCAGAGAATCCACAGTGGAGAGAGACCCTATGAATGTAATGAGTGTGGG
AAAGCTTTCAGTCATAGCTCACACCTCATTGGACATCAGAGAATCCACACTGGGGAGAAG
CCCTATGAGTGTGATGAGTGTGGGAAAACCTTCAGGCGGAGCTCACATCTTATTGGTCAT
CAGAGGAGCCACACTGGGGAGAAACCCTACAAATGCAATGAGTGTGGGAGGGCCTTCAGT
CAGAAGTCAGGCCTTATTGAACATCAGAGAATCCACACTGGAGAAAGACCCTATAAATGT
AAAGAATGTGGGAAAGCTTTCAATGGGAACACTGGTCTCATTCAACACCTGAGAATTCAC
ACAGGGGAGAAGCCCTACCAATGTAATGAGTGTGGGAAAGCCTTTATTCAGAGGTCAAGT
CTCATTCGACATCAGAGAATCCACAGTGGTGAAAAATCTGAATCCATAAGCGTT

ORF Protein

Cloned ORF protein sequence for pFN21AB7881 Download

>KIBB7881  578 aa
MAEESRKPSAPSPPDQTPEEDLVIVKVEEDHGWDQESSLHESNPLGQEVFRLRFRQLRYQ
ETLGPREALIQLRALCHQWLRPDLNTKEQILELLVLEQFLTILPEELQTLVKEHQLENGE
EVVTLLEDLERQIDILGRPVSARVHGHRVLWEEVVHSASAPEPPNTQLQSEATQHKSPVP
QESQERAMSTSQSPTRSQKGSSGDQEMTATLLTAGFQTLEKIEDMAVSLIREEWLLDPSQ
KDLCRDNRPENFRNMFSLGGETRSENRELASKQVISTGIQPHGETAAKCNGDVIRGLEHE
EARDLLGRLERQRGNPTQERRHKCDECGKSFAQSSGLVRHWRIHTGEKPYQCNVCGKAFS
YRSALLSHQDIHNKVKRYHCKECGKAFSQNTGLILHQRIHTGEKPYQCNQCGKAFSQSAG
LILHQRIHSGERPYECNECGKAFSHSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGH
QRSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGERPYKCKECGKAFNGNTGLIQHLRIH
TGEKPYQCNECGKAFIQRSSLIRHQRIHSGEKSESISV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7881 Download

>pFN21AB7881  6439 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGAAGAATCAAGAAAGCCTTCAGCCCCATC
CCCACCAGACCAGACTCCTGAAGAGGATCTTGTAATCGTCAAGGTAGAGGAGGATCATGG
TTGGGACCAGGAATCTAGTCTGCATGAAAGTAACCCTCTTGGCCAAGAAGTGTTCCGCCT
GCGCTTCAGGCAGTTACGCTACCAGGAGACACTAGGACCCCGAGAAGCTCTGATCCAACT
ACGGGCCCTTTGCCATCAGTGGCTGAGGCCAGATTTGAACACCAAGGAACAGATCCTGGA
GCTGCTGGTGCTGGAGCAGTTCTTGACCATCCTACCTGAGGAGCTCCAGACACTGGTTAA
GGAACATCAGCTAGAGAACGGAGAGGAGGTGGTGACCCTATTAGAGGATTTGGAAAGGCA
GATTGATATACTAGGACGACCAGTCTCAGCTCGCGTACATGGACATAGGGTACTCTGGGA
GGAGGTAGTACATTCAGCATCTGCACCAGAGCCTCCAAATACTCAGCTCCAATCTGAGGC
AACCCAACATAAATCTCCAGTGCCCCAAGAGTCACAAGAGAGAGCCATGTCTACTTCCCA
GAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGGAGACCAGGAAATGACAGCTACACTTCT
CACAGCAGGGTTCCAGACTTTGGAGAAGATTGAAGACATGGCTGTGTCCCTTATTCGAGA
GGAGTGGCTTCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTT
CAGAAACATGTTCTCCCTGGGTGGTGAGACCAGGAGTGAGAACAGGGAATTAGCTTCAAA
ACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGA
TGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCA
GCGGGGAAATCCCACACAAGAGAGACGACATAAATGTGATGAATGTGGGAAAAGCTTTGC
TCAGAGCTCAGGCCTTGTTCGCCACTGGAGAATCCACACTGGGGAGAAACCCTATCAGTG
TAATGTGTGTGGTAAAGCCTTCAGTTACAGGTCAGCCCTTCTTTCACATCAGGATATCCA
CAACAAAGTAAAACGCTATCACTGTAAGGAGTGTGGCAAAGCCTTCAGTCAGAACACAGG
CCTGATTCTGCACCAGAGAATCCACACTGGGGAGAAGCCATATCAGTGCAATCAGTGTGG
GAAGGCTTTCAGTCAGAGTGCGGGCCTTATTCTGCACCAGAGAATCCACAGTGGAGAGAG
ACCCTATGAATGTAATGAGTGTGGGAAAGCTTTCAGTCATAGCTCACACCTCATTGGACA
TCAGAGAATCCACACTGGGGAGAAGCCCTATGAGTGTGATGAGTGTGGGAAAACCTTCAG
GCGGAGCTCACATCTTATTGGTCATCAGAGGAGCCACACTGGGGAGAAACCCTACAAATG
CAATGAGTGTGGGAGGGCCTTCAGTCAGAAGTCAGGCCTTATTGAACATCAGAGAATCCA
CACTGGAGAAAGACCCTATAAATGTAAAGAATGTGGGAAAGCTTTCAATGGGAACACTGG
TCTCATTCAACACCTGAGAATTCACACAGGGGAGAAGCCCTACCAATGTAATGAGTGTGG
GAAAGCCTTTATTCAGAGGTCAAGTCTCATTCGACATCAGAGAATCCACAGTGGTGAAAA
ATCTGAATCCATAAGCGTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT