TFEC ORF clone pFN21AB7922

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB7922

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Clone info.

Species

human

Clone Name

pFN21AB7922 Sequence (with vector) Restriction Map

Product ID

FHC23058

ORF Sequence

DNA sequence (1041 bp)
Protein sequence (347 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB7922

Symbol

TFEC

Alias : TCFEC, TFE-C, TFEC-L, TFECL, bHLHe34, hTFEC-L

Description

transcription factor EC, transcript variant 1

Original Clone ID

cs00422

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1041 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 347 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5762.1 1.2e-112 100.0 TFEC CCDS59076.1 8.6e-82 99.2 TFEC CCDS34738.1 9.5e-82 91.6 TFEC CCDS46866.2 7.4e-45 57.9 MITF CCDS43107.1 8.3e-45 57.9 MITF The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001092 140 193 PF00010 Helix-loop-helix DNA-binding domain IPR021802 225 345 PF11851 Protein of unknown function DUF3371 HMMSmart IPR001092 145 198 SM00353 Helix-loop-helix DNA-binding domain ProfileScan IPR001092 137 193 PS50888 Helix-loop-helix DNA-binding domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_016867364 347 604732 100.0 100.0 NP_036384 347 604732 100.0 100.0 XP_011514267 437 604732 100.0 100.0 XP_011514268 437 604732 100.0 100.0 XP_011514266 437 604732 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7922 Download

>KIBB7922  1041 bp
ATGACCCTTGATCATCAGATCATCAATCCAACTCTTAAATGGTCACAACCTGCAGTGCCA
AGTGGTGGGCCTCTTGTGCAGCATGCACACACAACTCTGGACAGTGATGCTGGCCTCACA
GAAAACCCACTCACCAAGTTACTAGCTATTGGGAAAGAAGATGACAATGCACAATGGCAT
ATGGAGGACGTTATTGAGGATATAATCGGTATGGAATCAAGTTTTAAAGAGGAAGGAGCA
GACTCTCCTCTGCTAATGCAAAGAACATTATCTGGAAGTATTTTGGATGTGTATAGCGGT
GAACAAGGAATTTCACCAATTAACATGGGGCTTACAAGTGCTTCTTGTCCAAGTAGTCTA
CCAATGAAAAGAGAAATTACAGAAACTGACACTAGAGCTTTAGCAAAAGAGAGACAAAAA
AAGGACAACCACAACCTCATTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAG
GAGCTTGGCACTCTTATTCCAAAGTCTAATGATCCTGATATGCGCTGGAACAAAGGAACC
ATTCTAAAAGCATCAGTGGAGTACATCAAGTGGCTACAAAAAGAACAACAGAGAGCCCGA
GAATTGGAACACAGACAGAAGAAATTAGAGCAGGCTAACAGGCGACTTCTACTTCGGATT
CAGGAACTAGAAATTCAGGCTCGTACTCATGGTCTGCCAACCCTGGCTTCACTTGGCACG
GTTGATTTAGGTGCTCATGTCACCAAACAGCAGAGCCATCCTGAGCAGAATTCAGTAGAC
TATTGCCAACAACTGACTGTGTCTCAGGGGCCAAGCCCTGAGCTCTGTGATCAAGCTATA
GCCTTTTCTGATCCTTTGTCATACTTCACAGATTTATCATTTAGTGCTGCATTGAAAGAG
GAACAAAGATTGGATGGCATGCTATTGGATGACACAATCTCTCCATTTGGAACAGATCCT
CTGCTATCTGCCACTTCCCCTGCAGTTTCCAAAGAAAGCAGTAGGAGAAGTAGCTTTAGC
TCAGATGATGGTGATGAATTA

ORF Protein

Cloned ORF protein sequence for pFN21AB7922 Download

>KIBB7922  347 aa
MTLDHQIINPTLKWSQPAVPSGGPLVQHAHTTLDSDAGLTENPLTKLLAIGKEDDNAQWH
MEDVIEDIIGMESSFKEEGADSPLLMQRTLSGSILDVYSGEQGISPINMGLTSASCPSSL
PMKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGT
ILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLPTLASLGT
VDLGAHVTKQQSHPEQNSVDYCQQLTVSQGPSPELCDQAIAFSDPLSYFTDLSFSAALKE
EQRLDGMLLDDTISPFGTDPLLSATSPAVSKESSRRSSFSSDDGDEL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7922 Download

>pFN21AB7922  5746 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGACCCTTGATCATCAGATCATCAATCCAACTCT
TAAATGGTCACAACCTGCAGTGCCAAGTGGTGGGCCTCTTGTGCAGCATGCACACACAAC
TCTGGACAGTGATGCTGGCCTCACAGAAAACCCACTCACCAAGTTACTAGCTATTGGGAA
AGAAGATGACAATGCACAATGGCATATGGAGGACGTTATTGAGGATATAATCGGTATGGA
ATCAAGTTTTAAAGAGGAAGGAGCAGACTCTCCTCTGCTAATGCAAAGAACATTATCTGG
AAGTATTTTGGATGTGTATAGCGGTGAACAAGGAATTTCACCAATTAACATGGGGCTTAC
AAGTGCTTCTTGTCCAAGTAGTCTACCAATGAAAAGAGAAATTACAGAAACTGACACTAG
AGCTTTAGCAAAAGAGAGACAAAAAAAGGACAACCACAACCTCATTGAAAGAAGAAGAAG
GTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCTTATTCCAAAGTCTAATGATCC
TGATATGCGCTGGAACAAAGGAACCATTCTAAAAGCATCAGTGGAGTACATCAAGTGGCT
ACAAAAAGAACAACAGAGAGCCCGAGAATTGGAACACAGACAGAAGAAATTAGAGCAGGC
TAACAGGCGACTTCTACTTCGGATTCAGGAACTAGAAATTCAGGCTCGTACTCATGGTCT
GCCAACCCTGGCTTCACTTGGCACGGTTGATTTAGGTGCTCATGTCACCAAACAGCAGAG
CCATCCTGAGCAGAATTCAGTAGACTATTGCCAACAACTGACTGTGTCTCAGGGGCCAAG
CCCTGAGCTCTGTGATCAAGCTATAGCCTTTTCTGATCCTTTGTCATACTTCACAGATTT
ATCATTTAGTGCTGCATTGAAAGAGGAACAAAGATTGGATGGCATGCTATTGGATGACAC
AATCTCTCCATTTGGAACAGATCCTCTGCTATCTGCCACTTCCCCTGCAGTTTCCAAAGA
AAGCAGTAGGAGAAGTAGCTTTAGCTCAGATGATGGTGATGAATTAGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT