PKNOX2 ORF clone pFN21AB8291

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AB8291

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Clone info.

Species

human

Clone Name

pFN21AB8291 Sequence (with vector) Restriction Map

Product ID

FHC02728

Flexi Clone PID

FXC02728

Original Clone PID

ORK02728

ORF Sequence

DNA sequence (1416 bp)
Protein sequence (472 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464002]

Gene

KIBB8291

Symbol

PKNOX2

Alias : PREP2

Description

PBX/knotted 1 homeobox 2

Original Clone ID

cp00651

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1416 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 472 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41730.1 8.2e-124 100.0 PKNOX2 CCDS68211.1 7.9e-34 58.5 PKNOX1 CCDS13692.1 3.1e-27 58.1 PKNOX1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 298 345 PF00046 Homeobox HMMSmart IPR001356 288 353 SM00389 Homeobox ProfileScan IPR001356 286 349 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071345 472 613066 100.0 100.0 XP_011541247 472 613066 100.0 100.0 XP_011541246 472 613066 100.0 100.0 XP_005271699 472 613066 100.0 100.0 XP_016873599 472 613066 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8291 Download

>KIBB8291  1416 bp
ATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTCCCG
CCCCCACCCTACCAGGACAGCCCACAGATGACGGCAACCGCCCAGCCACCCTCCAAGGCC
CAGGCTGTCCACATCTCTGCCCCCTCAGCTGCTGCCAGCACACCTGTGCCCAGTGCCCCC
ATCGACCCCCAGGCCCAGCTGGAGGCTGACAAGCGAGCTGTATACAGGCACCCTCTTTTC
CCGCTCCTGACGCTGCTGTTTGAGAAATGTGAACAGGCCACCCAGGGCTCTGAGTGCATC
ACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCAC
AAACCCTTCTTCAGCGATGACCCAGAACTGGACAATCTGATGGTGAAGGCAATCCAGGTC
CTGAGAATCCACCTGCTGGAGCTGGAGAAAGTCAATGAACTCTGCAAGGACTTTTGTAAC
CGTTACATCACCTGCCTCAAAACCAAGATGCACAGCGACAACCTGCTCAGGAATGATCTA
GGGGGGCCCTACTCCCCCAACCAGCCCTCCATCAACCTTCACTCACAGGACCTCCTGCAG
AATTCCCCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
TCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGT
GGAGCCTTATACCAACCGGTTACCATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGCA
ATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCCCTC
CTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCCCAAGCATGCCACC
AATATAATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCCCTACCCCACGGAGGATGAG
AAGAGGCAGATCGCAGCCCAGACCAACCTCACCCTCCTGCAAGTAAACAACTGGTTCATC
AATGCCCGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCC
AAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATC
GCTGCGGGGGTGCTGCAGCAGCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATC
AACTTGGACAACCTGCAGTCCCTGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGGCT
ATGATGGCTGCACACGATGACTCATTGGATGGGACAGAAGAAGAGGATGAGGATGAGATG
GAAGAGGAGGAGGAGGAGGAGCTGGAGGAGGAGGTCGACGAGCTGCAGACGACAAATGTC
AGCGACCTGGGCTTGGAACACAGTGACTCCCTGGAG

ORF Protein

Cloned ORF protein sequence for pFN21AB8291 Download

>KIBB8291  472 aa
MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP
IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAMQQA
MMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8291 Download

>pFN21AB8291  6121 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATGCAACATGCCTCCCCAGCCCCCGCTCTGAC
GATGATGGCCACGCAGAATGTCCCGCCCCCACCCTACCAGGACAGCCCACAGATGACGGC
AACCGCCCAGCCACCCTCCAAGGCCCAGGCTGTCCACATCTCTGCCCCCTCAGCTGCTGC
CAGCACACCTGTGCCCAGTGCCCCCATCGACCCCCAGGCCCAGCTGGAGGCTGACAAGCG
AGCTGTATACAGGCACCCTCTTTTCCCGCTCCTGACGCTGCTGTTTGAGAAATGTGAACA
GGCCACCCAGGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTT
TGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCCAGAACTGGACAA
TCTGATGGTGAAGGCAATCCAGGTCCTGAGAATCCACCTGCTGGAGCTGGAGAAAGTCAA
TGAACTCTGCAAGGACTTTTGTAACCGTTACATCACCTGCCTCAAAACCAAGATGCACAG
CGACAACCTGCTCAGGAATGATCTAGGGGGGCCCTACTCCCCCAACCAGCCCTCCATCAA
CCTTCACTCACAGGACCTCCTGCAGAATTCCCCCAATTCCATGTCCGGAGTCTCCAATAA
CCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAAC
CGTCAACTCACAAGTTGTGTCAGGTGGAGCCTTATACCAACCGGTTACCATGGTAACCTC
CCAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACA
GGTTAACCTTGACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACG
AGGAGTCTTGCCCAAGCATGCCACCAATATAATGCGTTCTTGGCTCTTCCAGCATCTCAT
GCACCCCTACCCCACGGAGGATGAGAAGAGGCAGATCGCAGCCCAGACCAACCTCACCCT
CCTGCAAGTAAACAACTGGTTCATCAATGCCCGGAGGCGCATCCTGCAGCCCATGCTTGA
TGCCAGCAACCCAGATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCAC
CCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCAGCAGCAGGGCGGTGCCCC
AGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAG
TGCCACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGGGAC
AGAAGAAGAGGATGAGGATGAGATGGAAGAGGAGGAGGAGGAGGAGCTGGAGGAGGAGGT
CGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAGTGACTCCCTGGA
GGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T