SYT3 ORF clone pFN21AB8669

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Halotag ORF Clone pFN21AB8669

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Clone info.

Species

human

Clone Name

pFN21AB8669 Sequence (with vector) Restriction Map

Product ID

FHC02922

Flexi Clone PID

FXC02922

ORF Sequence

DNA sequence (1770 bp)
Protein sequence (590 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463256]

Gene

KIBB8669

Symbol

SYT3

Alias : SytIII

Description

synaptotagmin III, transcript variant 1

Original Clone ID

oc00332

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1770 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 590 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12798.1 2.7e-127 100.0 SYT3 CCDS871.1 1.2e-38 51.7 SYT6 CCDS8732.1 1.5e-37 46.3 SYT10 CCDS7778.1 1.5e-37 48.0 SYT9 CCDS1427.1 2.5e-26 49.7 SYT2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001565 303 318 PR00399 Synaptotagmin IPR001565 318 331 PR00399 Synaptotagmin IPR020477 331 343 PR00360 C2 region IPR020477 358 371 PR00360 C2 region IPR001565 373 388 PR00399 Synaptotagmin IPR020477 382 390 PR00360 C2 region IPR001565 393 403 PR00399 Synaptotagmin HMMPfam IPR000008 316 401 PF00168 C2 calcium-dependent membrane targeting IPR000008 448 535 PF00168 C2 calcium-dependent membrane targeting HMMSmart IPR000008 315 418 SM00239 C2 calcium-dependent membrane targeting IPR000008 447 562 SM00239 C2 calcium-dependent membrane targeting ProfileScan IPR018029 313 402 PS50004 C2 membrane targeting protein IPR018029 445 536 PS50004 C2 membrane targeting protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 54 SLLSVIVTFCGIVLLGVSLFVSW 76 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115674 590 600327 100.0 100.0 NP_001153801 590 600327 100.0 100.0 NP_001153800 590 600327 100.0 100.0 XP_011525693 590 600327 100.0 100.0 XP_011525692 590 600327 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8669 Download

>KIBB8669  1770 bp
ATGTCAGGAGACTACGAGGATGACCTCTGCCGGCGGGCACTCATCCTGGTCTCGGACCTC
TGTGCGCGGGTCCGAGATGCTGACACCAACGACAGGTGCCAGGAGTTCAATGACCGAATC
CGAGGCTATCCCCGGGGTCCAGATGCAGACATCTCCGTGAGCCTGCTGTCGGTCATCGTG
ACATTCTGTGGCATTGTCCTTCTGGGTGTCTCTCTCTTCGTGTCCTGGAAGTTGTGCTGG
GTGCCCTGGCGGGACAAGGGAGGCTCGGCAGTGGGCGGTGGCCCCCTGCGCAAAGACCTA
GGCCCTGGTGTCGGGCTGGCAGGCCTGGTAGGCGGAGGCGGGCACCACCTGGCGGCTGGC
CTGGGTGGCCATCCTCTGCTGGGCGGCCCACACCACCATGCCCATGCCGCCCACCATCCA
CCCTTTGCTGAGCTGCTGGAGCCAGGCAGCCTGGGGGGTTCTGACACCCCTGAGCCCTCC
TACTTGGACATGGACTCGTATCCAGAGGCTGCAGCAGCAGCAGTGGCCGCTGGGGTCAAA
CCGAGCCAAACATCCCCTGAGCTGCCCTCTGAGGGGGGAGCAGGCTCTGGGTTGCTCCTG
CTGCCCCCCAGTGGTGGGGGCTTGCCCAGTGCCCAGTCACATCAGCAGGTCACAAGCCTG
GCACCCACTACCAGGTACCCAGCCCTGCCCCGACCCCTCACCCAGCAGACTCTGACCTCC
CAGCCGGACCCCAGCAGTGAGGAGCGCCCACCTGCCCTGCCCTTACCCCTGCCTGGAGGC
GAGGAAAAAGCCAAACTCATTGGGCAGATTAAGCCAGAGCTGTACCAGGGGACTGGCCCT
GGTGGCCGGCGGAGCGGTGGGGGCCCAGGCTCTGGAGAGGCAGGCACAGGGGCACCCTGT
GGCCGTATCAGCTTCGCCCTGCGGTACCTCTATGGCTCGGACCAGCTGGTGGTGAGGATC
CTGCAGGCCCTGGACCTCCCTGCCAAGGACTCCAACGGCTTCTCAGACCCCTACGTCAAG
ATCTACCTGCTGCCTGACCGCAAGAAAAAGTTTCAGACCAAGGTGCACAGGAAGACCCTG
AACCCCGTCTTCAATGAGACGTTTCAATTCTCGGTGCCCCTGGCCGAGCTGGCCCAACGC
AAACTGCACTTCAGCGTCTATGACTTTGACCGCTTCTCGCGGCACGACCTCATCGGCCAG
GTGGTGCTGGACAACCTCCTGGAGCTGGCCGAGCAGCCCCCTGACCGCCCGCTCTGGAGG
GACATCGTGGAGGGCGGCTCGGAAAAAGCAGATCTTGGGGAGCTCAACTTCTCACTCTGC
TACCTCCCCACGGCCGGGCGCCTCACCGTGACCATCATCAAAGCCTCTAACCTCAAAGCG
ATGGACCTCACTGGCTTCTCAGACCCCTACGTGAAGGCCTCCCTGATCAGCGAGGGGCGG
CGTCTGAAGAAGCGGAAAACCTCCATCAAGAAGAACACGCTGAACCCCACCTATAATGAG
GCGCTGGTGTTCGACGTGGCCCCCGAGAGCGTGGAGAACGTGGGGCTCAGCATCGCCGTG
GTGGACTACGACTGCATCGGGCACAACGAGGTGATCGGCGTGTGCCGTGTGGGCCCCGAC
GCTGCCGACCCGCACGGCCGCGAGCACTGGGCAGAGATGCTGGCCAATCCCCGCAAGCCC
GTGGAGCACTGGCATCAGCTAGTGGAGGAAAAGACTGTGACCAGCTTCACAAAAGGCAGC
AAAGGACTATCAGAGAAAGAGAACTCCGAG

ORF Protein

Cloned ORF protein sequence for pFN21AB8669 Download

>KIBB8669  590 aa
MSGDYEDDLCRRALILVSDLCARVRDADTNDRCQEFNDRIRGYPRGPDADISVSLLSVIV
TFCGIVLLGVSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLGPGVGLAGLVGGGGHHLAAG
LGGHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPSYLDMDSYPEAAAAAVAAGVK
PSQTSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTS
QPDPSSEERPPALPLPLPGGEEKAKLIGQIKPELYQGTGPGGRRSGGGPGSGEAGTGAPC
GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTL
NPVFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWR
DIVEGGSEKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSDPYVKASLISEGR
RLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPD
AADPHGREHWAEMLANPRKPVEHWHQLVEEKTVTSFTKGSKGLSEKENSE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8669 Download

>pFN21AB8669  6475 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCAGGAGACTACGAGGATGACCTCTGCCGGCG
GGCACTCATCCTGGTCTCGGACCTCTGTGCGCGGGTCCGAGATGCTGACACCAACGACAG
GTGCCAGGAGTTCAATGACCGAATCCGAGGCTATCCCCGGGGTCCAGATGCAGACATCTC
CGTGAGCCTGCTGTCGGTCATCGTGACATTCTGTGGCATTGTCCTTCTGGGTGTCTCTCT
CTTCGTGTCCTGGAAGTTGTGCTGGGTGCCCTGGCGGGACAAGGGAGGCTCGGCAGTGGG
CGGTGGCCCCCTGCGCAAAGACCTAGGCCCTGGTGTCGGGCTGGCAGGCCTGGTAGGCGG
AGGCGGGCACCACCTGGCGGCTGGCCTGGGTGGCCATCCTCTGCTGGGCGGCCCACACCA
CCATGCCCATGCCGCCCACCATCCACCCTTTGCTGAGCTGCTGGAGCCAGGCAGCCTGGG
GGGTTCTGACACCCCTGAGCCCTCCTACTTGGACATGGACTCGTATCCAGAGGCTGCAGC
AGCAGCAGTGGCCGCTGGGGTCAAACCGAGCCAAACATCCCCTGAGCTGCCCTCTGAGGG
GGGAGCAGGCTCTGGGTTGCTCCTGCTGCCCCCCAGTGGTGGGGGCTTGCCCAGTGCCCA
GTCACATCAGCAGGTCACAAGCCTGGCACCCACTACCAGGTACCCAGCCCTGCCCCGACC
CCTCACCCAGCAGACTCTGACCTCCCAGCCGGACCCCAGCAGTGAGGAGCGCCCACCTGC
CCTGCCCTTACCCCTGCCTGGAGGCGAGGAAAAAGCCAAACTCATTGGGCAGATTAAGCC
AGAGCTGTACCAGGGGACTGGCCCTGGTGGCCGGCGGAGCGGTGGGGGCCCAGGCTCTGG
AGAGGCAGGCACAGGGGCACCCTGTGGCCGTATCAGCTTCGCCCTGCGGTACCTCTATGG
CTCGGACCAGCTGGTGGTGAGGATCCTGCAGGCCCTGGACCTCCCTGCCAAGGACTCCAA
CGGCTTCTCAGACCCCTACGTCAAGATCTACCTGCTGCCTGACCGCAAGAAAAAGTTTCA
GACCAAGGTGCACAGGAAGACCCTGAACCCCGTCTTCAATGAGACGTTTCAATTCTCGGT
GCCCCTGGCCGAGCTGGCCCAACGCAAACTGCACTTCAGCGTCTATGACTTTGACCGCTT
CTCGCGGCACGACCTCATCGGCCAGGTGGTGCTGGACAACCTCCTGGAGCTGGCCGAGCA
GCCCCCTGACCGCCCGCTCTGGAGGGACATCGTGGAGGGCGGCTCGGAAAAAGCAGATCT
TGGGGAGCTCAACTTCTCACTCTGCTACCTCCCCACGGCCGGGCGCCTCACCGTGACCAT
CATCAAAGCCTCTAACCTCAAAGCGATGGACCTCACTGGCTTCTCAGACCCCTACGTGAA
GGCCTCCCTGATCAGCGAGGGGCGGCGTCTGAAGAAGCGGAAAACCTCCATCAAGAAGAA
CACGCTGAACCCCACCTATAATGAGGCGCTGGTGTTCGACGTGGCCCCCGAGAGCGTGGA
GAACGTGGGGCTCAGCATCGCCGTGGTGGACTACGACTGCATCGGGCACAACGAGGTGAT
CGGCGTGTGCCGTGTGGGCCCCGACGCTGCCGACCCGCACGGCCGCGAGCACTGGGCAGA
GATGCTGGCCAATCCCCGCAAGCCCGTGGAGCACTGGCATCAGCTAGTGGAGGAAAAGAC
TGTGACCAGCTTCACAAAAGGCAGCAAAGGACTATCAGAGAAAGAGAACTCCGAGGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT