SP8 ORF clone pFN21AB9871

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Halotag ORF Clone pFN21AB9871

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Clone info.

Species

human

Clone Name

pFN21AB9871 Sequence (with vector) Restriction Map

Product ID

FHC03373

Flexi Clone PID

FXC03373

ORF Sequence

DNA sequence (1470 bp)
Protein sequence (490 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464710]

Gene

KIBB9871

Symbol

SP8

Alias : BTD

Description

Sp8 transcription factor, transcript variant 2

Original Clone ID

cp00440

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1470 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 490 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5372.1 1.9e-88 100.0 SP8 CCDS43555.1 1.9e-88 100.0 SP8 CCDS46453.1 9.8e-37 58.7 SP9 CCDS73475.1 2.2e-17 40.6 SP7 CCDS44897.1 2.3e-17 40.5 SP7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 386 410 PF00096 Zinc finger HMMSmart IPR015880 356 380 SM00355 Zinc finger IPR015880 386 410 SM00355 Zinc finger IPR015880 416 438 SM00355 Zinc finger ProfileScan IPR007087 356 385 PS50157 Zinc finger IPR007087 386 415 PS50157 Zinc finger IPR007087 416 440 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_945194 490 608306 100.0 100.0 NP_874359 508 608306 100.0 100.0 NP_001287766 413 606633,613849 40.6 85.5 XP_011536202 413 606633,613849 40.6 85.5 NP_690599 431 606633,613849 40.5 87.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9871 Download

>KIBB9871  1470 bp
ATGCTTGCCGCTACCTGTAATAAGATAGGCAGCCCCAGCCCGTCTCCCTCCTCCCTCTCG
GACAGCTCTTCTTCCTTCGGCAAAGGCTTCCACCCCTGGAAACGCTCCTCGTCCTCTTCT
TCCGCCAGCTGCAACGTAGTGGGTTCCAGTCTCTCAAGCTTCGGCGTGTCCGGGGCCTCC
AGGAACGGCGGCTCGTCCTCGGCGGCTGCGGCGGCCGCGGCAGCAGCCGCGGCTGCCGCG
GCCCTGGTGTCCGACTCGTTCAGCTGCGGCGGCTCGCCTGGCTCCAGCGCCTTCTCCCTC
ACCTCCAGCAGCGCCGCAGCCGCCGCCGCCGCCGCCGCAGCCGCCGCCTCCAGCTCGCCC
TTCGCCAACGACTACTCTGTTTTCCAGGCCCCCGGAGTTTCCGGGGGCAGCGGCGGCGGC
GGCGGGGGCGGCGGCGGCGGCTCCTCCGCGCACTCGCAGGACGGCTCCCACCAGCCGGTG
TTCATCTCCAAGGTGCACACCTCTGTGGACGGGCTGCAGGGCATCTACCCGCGGGTGGGC
ATGGCGCACCCGTACGAGTCGTGGTTTAAGCCCTCGCACCCGGGCCTGGGTGCTGCGGGC
GAGGTGGGCTCGGCCGGCGCCTCCAGCTGGTGGGACGTGGGGGCCGGCTGGATCGACGTG
CAGAACCCGAACAGCGCGGCTGCGCTGCCCGGCTCGCTGCACCCTGCCGCCGGGGGGCTC
CAAACCTCGCTGCACTCGCCGCTCGGAGGCTACAACTCGGATTACTCAGGCCTGAGTCAC
TCGGCCTTCAGCAGCGGCGCCTCCTCGCACCTGCTCAGCCCCGCCGGGCAGCACCTCATG
GACGGCTTCAAGCCAGTGCTACCCGGCTCCTACCCGGACTCGGCCCCGTCGCCGCTGGCC
GGCGCGGGGGGCTCCATGTTGAGCGCTGGGCCTTCGGCGCCGCTGGGGGGCTCCCCGCGC
TCCTCAGCTCGCCGCTACTCCGGCCGCGCCACCTGCGACTGCCCCAACTGCCAGGAGGCA
GAGCGGCTGGGCCCTGCCGGGGCGAGCTTGCGGCGCAAGGGCCTGCACAGCTGCCACATC
CCGGGCTGCGGCAAGGTGTACGGCAAGACTTCGCACCTCAAGGCGCACCTGCGCTGGCAC
ACGGGCGAGCGGCCCTTCGTGTGCAACTGGCTTTTCTGCGGCAAGCGCTTCACGCGCTCC
GACGAGCTGCAGCGGCACCTGCGGACCCACACCGGCGAGAAGCGCTTCGCCTGTCCAGTT
TGCAACAAGCGCTTCATGCGCAGCGACCACCTCAGCAAGCACGTGAAGACGCACAGTGGC
GGCGGCGGCGGCGGCGGCTCGGCGGGCTCGGGCAGCGGCGGCAAGAAGGGCAGCGACACC
GACAGCGAGCACAGCGCCGCGGGCAGCCCGCCCTGCCACTCCCCAGAGCTGCTGCAGCCC
CCCGAGCCCGGGCACCGCAACGGCCTAGAG

ORF Protein

Cloned ORF protein sequence for pFN21AB9871 Download

>KIBB9871  490 aa
MLAATCNKIGSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGAS
RNGGSSSAAAAAAAAAAAAAALVSDSFSCGGSPGSSAFSLTSSSAAAAAAAAAAAASSSP
FANDYSVFQAPGVSGGSGGGGGGGGGGSSAHSQDGSHQPVFISKVHTSVDGLQGIYPRVG
MAHPYESWFKPSHPGLGAAGEVGSAGASSWWDVGAGWIDVQNPNSAAALPGSLHPAAGGL
QTSLHSPLGGYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPLA
GAGGSMLSAGPSAPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLHSCHI
PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPV
CNKRFMRSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSPPCHSPELLQP
PEPGHRNGLE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9871 Download

>pFN21AB9871  6175 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCTTGCCGCTACCTGTAATAAGATAGGCAGCCC
CAGCCCGTCTCCCTCCTCCCTCTCGGACAGCTCTTCTTCCTTCGGCAAAGGCTTCCACCC
CTGGAAACGCTCCTCGTCCTCTTCTTCCGCCAGCTGCAACGTAGTGGGTTCCAGTCTCTC
AAGCTTCGGCGTGTCCGGGGCCTCCAGGAACGGCGGCTCGTCCTCGGCGGCTGCGGCGGC
CGCGGCAGCAGCCGCGGCTGCCGCGGCCCTGGTGTCCGACTCGTTCAGCTGCGGCGGCTC
GCCTGGCTCCAGCGCCTTCTCCCTCACCTCCAGCAGCGCCGCAGCCGCCGCCGCCGCCGC
CGCAGCCGCCGCCTCCAGCTCGCCCTTCGCCAACGACTACTCTGTTTTCCAGGCCCCCGG
AGTTTCCGGGGGCAGCGGCGGCGGCGGCGGGGGCGGCGGCGGCGGCTCCTCCGCGCACTC
GCAGGACGGCTCCCACCAGCCGGTGTTCATCTCCAAGGTGCACACCTCTGTGGACGGGCT
GCAGGGCATCTACCCGCGGGTGGGCATGGCGCACCCGTACGAGTCGTGGTTTAAGCCCTC
GCACCCGGGCCTGGGTGCTGCGGGCGAGGTGGGCTCGGCCGGCGCCTCCAGCTGGTGGGA
CGTGGGGGCCGGCTGGATCGACGTGCAGAACCCGAACAGCGCGGCTGCGCTGCCCGGCTC
GCTGCACCCTGCCGCCGGGGGGCTCCAAACCTCGCTGCACTCGCCGCTCGGAGGCTACAA
CTCGGATTACTCAGGCCTGAGTCACTCGGCCTTCAGCAGCGGCGCCTCCTCGCACCTGCT
CAGCCCCGCCGGGCAGCACCTCATGGACGGCTTCAAGCCAGTGCTACCCGGCTCCTACCC
GGACTCGGCCCCGTCGCCGCTGGCCGGCGCGGGGGGCTCCATGTTGAGCGCTGGGCCTTC
GGCGCCGCTGGGGGGCTCCCCGCGCTCCTCAGCTCGCCGCTACTCCGGCCGCGCCACCTG
CGACTGCCCCAACTGCCAGGAGGCAGAGCGGCTGGGCCCTGCCGGGGCGAGCTTGCGGCG
CAAGGGCCTGCACAGCTGCCACATCCCGGGCTGCGGCAAGGTGTACGGCAAGACTTCGCA
CCTCAAGGCGCACCTGCGCTGGCACACGGGCGAGCGGCCCTTCGTGTGCAACTGGCTTTT
CTGCGGCAAGCGCTTCACGCGCTCCGACGAGCTGCAGCGGCACCTGCGGACCCACACCGG
CGAGAAGCGCTTCGCCTGTCCAGTTTGCAACAAGCGCTTCATGCGCAGCGACCACCTCAG
CAAGCACGTGAAGACGCACAGTGGCGGCGGCGGCGGCGGCGGCTCGGCGGGCTCGGGCAG
CGGCGGCAAGAAGGGCAGCGACACCGACAGCGAGCACAGCGCCGCGGGCAGCCCGCCCTG
CCACTCCCCAGAGCTGCTGCAGCCCCCCGAGCCCGGGCACCGCAACGGCCTAGAGGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT