NXF2 ORF clone pFN21AB9928

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Halotag ORF Clone pFN21AB9928

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Clone info.

Species

human

Clone Name

pFN21AB9928 Sequence (with vector) Restriction Map

Product ID

FHC11710

Flexi Clone PID

FXC11710

ORF Sequence

DNA sequence (1878 bp)
Protein sequence (626 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529188]

Gene

KIBB9928

Symbol

NXF2

Alias : CT39, TAPL-2, TCP11X2

Description

nuclear RNA export factor 2

Original Clone ID

cs01628

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1878 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 626 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS14497.1 0 100.0 NXF2 CCDS43979.1 0 100.0 NXF2B CCDS8037.1 1.5e-143 59.3 NXF1 CCDS14491.2 2.3e-106 81.5 NXF5 CCDS44629.1 2.2e-69 54.5 NXF1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition BlastProDom IPR015245 112 191 PD043466 Tap HMMPfam NULL 119 205 PF09162 NULL IPR002075 392 540 PF02136 Nuclear transport factor 2 IPR005637 573 623 PF03943 TAP HMMSmart IPR005637 561 624 SM00804 TAP ProfileScan IPR001611 271 292 PS51450 Leucine-rich repeat IPR001611 297 318 PS51450 Leucine-rich repeat IPR001611 321 342 PS51450 Leucine-rich repeat IPR018222 391 541 PS50177 Nuclear transport factor 2 IPR005637 570 625 PS51281 TAP
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_071336 626 300315 100.0 100.0 NP_006353 619 602647 59.3 97.0 NP_071335 531 300316 52.1 89.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9928 Download

>KIBB9928  1878 bp
ATGTGCTCTACTCTAAAGAAGTGTGGGACATACAGAACTGAAGTTGCAGAATGCCATGAC
CATGGTAGCACTTTTCAAGGAAGAAAGAAAGGTGGGAGTTCTTTCCGGGATAATTTTGAC
AAGAGGAGCTGTCATTATGAACATGGTGGGTATGAGCGCCCGCCTTCACACTGCCAGGAG
AATGATGGAAGCGTGGAGATGAGGGATGTCCACAAGGACCAACAACTAAGACACACTCCT
TATAGCATCCGATGCGAAAGAAGAATGAAATGGCATAGTGAAGACGAAATCCGTATTACC
ACGTGGAGAAATAGAAAACCTCCGGAGAGAAAAATGAGTCAGAACACACAGGATGGATAC
ACAAGGAACTGGTTTAAGGTCACAATTCCTTACGGGATAAAGTATGACAAGGCATGGCTA
ATGAATTCAATCCAGAGCCATTGCAGTGACCGCTTCACTCCGGTTGATTTCCACTACGTC
CGAAATCGGGCATGCTTCTTTGTCCAGGATGCTAGCGCTGCCTCCGCATTGAAGGATGTC
AGTTATAAGATTTATGATGATGAGAACCAAAAGATATGTATATTTGTCAATCATTCTACT
GCGCCCTACTCTGTGAAGAATAAGTTGAAGCCAGGCCAAATGGAGATGCTAAAGCTGACC
ATGAACAAACGGTACAATGTCTCCCAGCAAGCTCTTGATCTCCAGAATCTCCGCTTTGAC
CCAGACTTGATGGGCCGTGACATTGATATAATCCTGAATCGAAGAAACTGCATGGCTGCC
ACCCTGAAGATCATTGAAAGAAATTTCCCTGAGCTGTTGTCTTTGAACTTGTGCAACAAC
AAGCTGTACCAGCTGGATGGCCTTTCTGACATTACAGAGAAGGCTCCCAAAGTCAAGACC
CTGAATCTCTCCAAAAATAAGCTGGAGTCGGCGTGGGAGTTGGGCAAGGTGAAAGGGCTG
AAGCTCGAAGAGCTATGGCTAGAAGGGAACCCGTTGTGCAGCACCTTCTCGGACCAGTCC
GCCTATGTAAGTGCCATCCGGGATTGTTTCCCCAAGTTGTTACGCCTGGACGGCCGAGAG
TTATCCGCACCAGTGATTGTTGACATTGACAGCTCTGAGACAATGAAACCCTGCAAGGAA
AACTTTACTGGATCTGAGACCCTAAAGCATTTAGTCCTGCAATTCCTGCAGCAGTATTAC
TCGATCTATGACTCTGGAGATCGACAGGGTCTCCTCGGTGCTTACCACGATGAGGCCTGC
TTCTCCTTGGCTATTCCCTTCGACCCCAAGGACTCAGCCCCGAGCAGCTTGTGCAAGTAC
TTTGAGGATAGCAGGAATATGAAAACACTCAAGGACCCCTACCTGAAGGGGGAACTGCTG
AGGCGCACAAAACGTGACATTGTGGACTCCCTCAGTGCGTTGCCCAAAACTCAGCATGAC
CTCAGCTCCATCCTGGTGGACGTGTGGTGCCAGACGGAAAGGATGCTCTGCTTTTCTGTC
AATGGGGTTTTCAAGGAAGTGGAAGGACAGTCTCAGGGTTCTGTTCTCGCCTTCACCCGG
ACCTTCATTGCTACCCCTGGCAGCAGTTCCAGTCTGTGCATCGTGAATGACGAGCTGTTT
GTGAGGGATGCCAGCCCCCAAGAGACTCAGAGTGCCTTCTCCATCCCAGTGTCCACACTC
TCCTCCAGCTCTGAGCCCTCCCTCTCCCAGGAGCAGCAGGAAATGGTGCAGGCTTTCTCT
GCCCAGTCTGGGATGAAACTGGAGTGGTCTCAGAAGTGCCTTCAGGACAATGAGTGGAAC
TACACTAGAGCTGGCCAGGCCTTCACTATGCTCCAGACCGAGGGCAAGATCCCCGCAGAG
GCCTTCAAGCAAATCTCC

ORF Protein

Cloned ORF protein sequence for pFN21AB9928 Download

>KIBB9928  626 aa
MCSTLKKCGTYRTEVAECHDHGSTFQGRKKGGSSFRDNFDKRSCHYEHGGYERPPSHCQE
NDGSVEMRDVHKDQQLRHTPYSIRCERRMKWHSEDEIRITTWRNRKPPERKMSQNTQDGY
TRNWFKVTIPYGIKYDKAWLMNSIQSHCSDRFTPVDFHYVRNRACFFVQDASAASALKDV
SYKIYDDENQKICIFVNHSTAPYSVKNKLKPGQMEMLKLTMNKRYNVSQQALDLQNLRFD
PDLMGRDIDIILNRRNCMAATLKIIERNFPELLSLNLCNNKLYQLDGLSDITEKAPKVKT
LNLSKNKLESAWELGKVKGLKLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDGRE
LSAPVIVDIDSSETMKPCKENFTGSETLKHLVLQFLQQYYSIYDSGDRQGLLGAYHDEAC
FSLAIPFDPKDSAPSSLCKYFEDSRNMKTLKDPYLKGELLRRTKRDIVDSLSALPKTQHD
LSSILVDVWCQTERMLCFSVNGVFKEVEGQSQGSVLAFTRTFIATPGSSSSLCIVNDELF
VRDASPQETQSAFSIPVSTLSSSSEPSLSQEQQEMVQAFSAQSGMKLEWSQKCLQDNEWN
YTRAGQAFTMLQTEGKIPAEAFKQIS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9928 Download

>pFN21AB9928  6583 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTGCTCTACTCTAAAGAAGTGTGGGACATACAG
AACTGAAGTTGCAGAATGCCATGACCATGGTAGCACTTTTCAAGGAAGAAAGAAAGGTGG
GAGTTCTTTCCGGGATAATTTTGACAAGAGGAGCTGTCATTATGAACATGGTGGGTATGA
GCGCCCGCCTTCACACTGCCAGGAGAATGATGGAAGCGTGGAGATGAGGGATGTCCACAA
GGACCAACAACTAAGACACACTCCTTATAGCATCCGATGCGAAAGAAGAATGAAATGGCA
TAGTGAAGACGAAATCCGTATTACCACGTGGAGAAATAGAAAACCTCCGGAGAGAAAAAT
GAGTCAGAACACACAGGATGGATACACAAGGAACTGGTTTAAGGTCACAATTCCTTACGG
GATAAAGTATGACAAGGCATGGCTAATGAATTCAATCCAGAGCCATTGCAGTGACCGCTT
CACTCCGGTTGATTTCCACTACGTCCGAAATCGGGCATGCTTCTTTGTCCAGGATGCTAG
CGCTGCCTCCGCATTGAAGGATGTCAGTTATAAGATTTATGATGATGAGAACCAAAAGAT
ATGTATATTTGTCAATCATTCTACTGCGCCCTACTCTGTGAAGAATAAGTTGAAGCCAGG
CCAAATGGAGATGCTAAAGCTGACCATGAACAAACGGTACAATGTCTCCCAGCAAGCTCT
TGATCTCCAGAATCTCCGCTTTGACCCAGACTTGATGGGCCGTGACATTGATATAATCCT
GAATCGAAGAAACTGCATGGCTGCCACCCTGAAGATCATTGAAAGAAATTTCCCTGAGCT
GTTGTCTTTGAACTTGTGCAACAACAAGCTGTACCAGCTGGATGGCCTTTCTGACATTAC
AGAGAAGGCTCCCAAAGTCAAGACCCTGAATCTCTCCAAAAATAAGCTGGAGTCGGCGTG
GGAGTTGGGCAAGGTGAAAGGGCTGAAGCTCGAAGAGCTATGGCTAGAAGGGAACCCGTT
GTGCAGCACCTTCTCGGACCAGTCCGCCTATGTAAGTGCCATCCGGGATTGTTTCCCCAA
GTTGTTACGCCTGGACGGCCGAGAGTTATCCGCACCAGTGATTGTTGACATTGACAGCTC
TGAGACAATGAAACCCTGCAAGGAAAACTTTACTGGATCTGAGACCCTAAAGCATTTAGT
CCTGCAATTCCTGCAGCAGTATTACTCGATCTATGACTCTGGAGATCGACAGGGTCTCCT
CGGTGCTTACCACGATGAGGCCTGCTTCTCCTTGGCTATTCCCTTCGACCCCAAGGACTC
AGCCCCGAGCAGCTTGTGCAAGTACTTTGAGGATAGCAGGAATATGAAAACACTCAAGGA
CCCCTACCTGAAGGGGGAACTGCTGAGGCGCACAAAACGTGACATTGTGGACTCCCTCAG
TGCGTTGCCCAAAACTCAGCATGACCTCAGCTCCATCCTGGTGGACGTGTGGTGCCAGAC
GGAAAGGATGCTCTGCTTTTCTGTCAATGGGGTTTTCAAGGAAGTGGAAGGACAGTCTCA
GGGTTCTGTTCTCGCCTTCACCCGGACCTTCATTGCTACCCCTGGCAGCAGTTCCAGTCT
GTGCATCGTGAATGACGAGCTGTTTGTGAGGGATGCCAGCCCCCAAGAGACTCAGAGTGC
CTTCTCCATCCCAGTGTCCACACTCTCCTCCAGCTCTGAGCCCTCCCTCTCCCAGGAGCA
GCAGGAAATGGTGCAGGCTTTCTCTGCCCAGTCTGGGATGAAACTGGAGTGGTCTCAGAA
GTGCCTTCAGGACAATGAGTGGAACTACACTAGAGCTGGCCAGGCCTTCACTATGCTCCA
GACCGAGGGCAAGATCCCCGCAGAGGCCTTCAAGCAAATCTCCGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT