Characterization of the cloned ORF
N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand
Length: 1908 bp
Restriction map A
Restriction map B
Genomic Structure
Length: 636 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
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Cloned ORF Nucleotide sequence for pFN21AE0040 Download
>KIEE0040 1908 bp ATGTGGAAGAGTTGGAAGCTCCGCACAGATGTCAGAGTAAGGGAGGGGGCAGGCGGTTCT CCTTGTGCCTCTTCCCAGCCCGGTAGCAGGGGCCCATGCTTCCTCCCTGGTCTGTCCTCG CAGGAGGTGTCCAGGCGGAGGCAGTTCCTGCGGGAGCATGCGGCCCCCTTCTCCGCCTTC CTCACAGACAGCTTCGGCCGGCAGCACAGCTACCTGCGGATCTCCCTCACAGAGAAGTGC AACCTCAGATGTCAGTACTGCATGCCCGAGGAGGGGGTCCCGCTGACCCCCAAAGCCAAC CTGCTGACCACAGAGGAGATCCTGACCCTCGCCCGGCTCTTTGTGAAGGAAGGCATCGAC AAGATCCGGCTCACAGGTGGAGAGCCGCTTATCCGGCCGGACGTGGTGGACATTGTGGCC CAGCTCCAGCGGCTGGAAGGGCTGAGAACCATAGGTGTTACCACCAATGGCATCAACCTG GCCCGGCTACTGCCCCAGCTTCAGAAGGCTGGTCTCAGTGCCATCAACATCAGCCTGGAC ACCCTGGTGCCTGCCAAGTTTGAGTTCATTGTCCGCAGGAAAGGCTTCCACAAGGTCATG GAGGGCATCCACAAGGCCATCGAGCTGGGCTACAACCCTGTGAAGGTGAACTGTGTGGTG ATGCGAGGCCTTAACGAGGATGAACTCCTGGACTTTGCGGCCTTGACTGAGGGCCTCCCC CTGGATGTGCGCTTCATAGAGTATATGCCCTTTGATGGCAACAAGTGGAACTTCAAGAAG ATGGTCAGCTATAAGGAGATGCTAGACACTGTCCGGCAGCAGTGGCCAGAGCTGGAGAAG GTGCCAGAGGAGGAATCCAGCACAGCCAAGGCCTTTAAAATCCCTGGCTTCCAAGGCCAG ATCAGCTTCATCACATCCATGTCTGAGCATTTCTGTGGGACCTGCAACCGCCTGCGAATC ACAGCTGATGGGAACCTCAAGGTCTGCCTCTTTGGAAACTCTGAGGTATCCCTGCGGGAT CACCTGCGAGCTGGGGCCTCTGAGCAGGAGCTGCTGAGAATCATTGGGGCTGCTGTGGGC AGGAAGAAGCGGCAGCATGCAGGCATGTTCAGTATTTCCCAGATGAAGAACCGGCCCATG ATCCTCATCGAGTTATTTTTGATGTTCCCCAATTCCCCACCAGCCAATCCAAGCATTTTC TCCTGGGACCCGCTCCATGTTCAGGGTCTAAGACCCAGAATGAGTTTCTCCAGCCAGGTG GCCACTTTATGGAAAGGATGCAGGGTCCCCCAGACCCCTCCTCTAGCCCAGCAGCGGCTG GGGTCTGGCTCCTTTCAGAGACACTACACTTCCCGTGCAGACTCAGATGCCAACTCAAAG TGCCTTAGCCCAGGTTCCTGGGCTTCTGCTGCCCCCTCAGGACCCCAGCTAACCTCAGAA CAACTAACTCATGTGGACTCGGAAGGACGGGCAGCTATGGTAGATGTGGGCAGGAAGCCA GACACAGAGCGGGTGGCTGTGGCTTCAGCCGTGGTCCTCCTGGGACCGGTAGCCTTCAAG CTTGTCCAGCAGAACCAGCTCAAGAAAGGAGATGCCCTAGTGGTGGCCCAGCTGGCTGGA GTCCAGGCAGCCAAGGTGACCAGCCAGCTGATCCCTCTGTGCCACCACGTGGCCCTGAGC CACATCCAGGTGCAGCTGGAGCTGGACAGCACACGCCATGCCGTGAAGATCCAGGCATCT TGCCGGGCTCGGGGCCCCACCGGGGTGGAGATGGAGGCCCTGACCTCTGCTGCAGTGGCC GCCCTCACCCTGTATGACATGTGCAAGGCTGTCAGCAGGGACATCGTGTTGGAGGAGATC AAGCTCATTAGCAAGACTGGTGGTCAGCGGGGGGACTTCCATCGGGCT
Cloned ORF protein sequence for pFN21AE0040 Download
>KIEE0040 636 aa MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSRRRQFLREHAAPFSAF LTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKEGID KIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLD TLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLP LDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQ ISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVG RKKRQHAGMFSISQMKNRPMILIELFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQV ATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSE QLTHVDSEGRAAMVDVGRKPDTERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAG VQAAKVTSQLIPLCHHVALSHIQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVA ALTLYDMCKAVSRDIVLEEIKLISKTGGQRGDFHRA
Nucleotide Sequence (with vector) for pFN21AE0040 Download
>pFN21AE0040 6613 bp TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA CTTTCAGAGCGATAACGCGATCGCCATGTGGAAGAGTTGGAAGCTCCGCACAGATGTCAG AGTAAGGGAGGGGGCAGGCGGTTCTCCTTGTGCCTCTTCCCAGCCCGGTAGCAGGGGCCC ATGCTTCCTCCCTGGTCTGTCCTCGCAGGAGGTGTCCAGGCGGAGGCAGTTCCTGCGGGA GCATGCGGCCCCCTTCTCCGCCTTCCTCACAGACAGCTTCGGCCGGCAGCACAGCTACCT GCGGATCTCCCTCACAGAGAAGTGCAACCTCAGATGTCAGTACTGCATGCCCGAGGAGGG GGTCCCGCTGACCCCCAAAGCCAACCTGCTGACCACAGAGGAGATCCTGACCCTCGCCCG GCTCTTTGTGAAGGAAGGCATCGACAAGATCCGGCTCACAGGTGGAGAGCCGCTTATCCG GCCGGACGTGGTGGACATTGTGGCCCAGCTCCAGCGGCTGGAAGGGCTGAGAACCATAGG TGTTACCACCAATGGCATCAACCTGGCCCGGCTACTGCCCCAGCTTCAGAAGGCTGGTCT CAGTGCCATCAACATCAGCCTGGACACCCTGGTGCCTGCCAAGTTTGAGTTCATTGTCCG CAGGAAAGGCTTCCACAAGGTCATGGAGGGCATCCACAAGGCCATCGAGCTGGGCTACAA CCCTGTGAAGGTGAACTGTGTGGTGATGCGAGGCCTTAACGAGGATGAACTCCTGGACTT TGCGGCCTTGACTGAGGGCCTCCCCCTGGATGTGCGCTTCATAGAGTATATGCCCTTTGA TGGCAACAAGTGGAACTTCAAGAAGATGGTCAGCTATAAGGAGATGCTAGACACTGTCCG GCAGCAGTGGCCAGAGCTGGAGAAGGTGCCAGAGGAGGAATCCAGCACAGCCAAGGCCTT TAAAATCCCTGGCTTCCAAGGCCAGATCAGCTTCATCACATCCATGTCTGAGCATTTCTG TGGGACCTGCAACCGCCTGCGAATCACAGCTGATGGGAACCTCAAGGTCTGCCTCTTTGG AAACTCTGAGGTATCCCTGCGGGATCACCTGCGAGCTGGGGCCTCTGAGCAGGAGCTGCT GAGAATCATTGGGGCTGCTGTGGGCAGGAAGAAGCGGCAGCATGCAGGCATGTTCAGTAT TTCCCAGATGAAGAACCGGCCCATGATCCTCATCGAGTTATTTTTGATGTTCCCCAATTC CCCACCAGCCAATCCAAGCATTTTCTCCTGGGACCCGCTCCATGTTCAGGGTCTAAGACC CAGAATGAGTTTCTCCAGCCAGGTGGCCACTTTATGGAAAGGATGCAGGGTCCCCCAGAC CCCTCCTCTAGCCCAGCAGCGGCTGGGGTCTGGCTCCTTTCAGAGACACTACACTTCCCG TGCAGACTCAGATGCCAACTCAAAGTGCCTTAGCCCAGGTTCCTGGGCTTCTGCTGCCCC CTCAGGACCCCAGCTAACCTCAGAACAACTAACTCATGTGGACTCGGAAGGACGGGCAGC TATGGTAGATGTGGGCAGGAAGCCAGACACAGAGCGGGTGGCTGTGGCTTCAGCCGTGGT CCTCCTGGGACCGGTAGCCTTCAAGCTTGTCCAGCAGAACCAGCTCAAGAAAGGAGATGC CCTAGTGGTGGCCCAGCTGGCTGGAGTCCAGGCAGCCAAGGTGACCAGCCAGCTGATCCC TCTGTGCCACCACGTGGCCCTGAGCCACATCCAGGTGCAGCTGGAGCTGGACAGCACACG CCATGCCGTGAAGATCCAGGCATCTTGCCGGGCTCGGGGCCCCACCGGGGTGGAGATGGA GGCCCTGACCTCTGCTGCAGTGGCCGCCCTCACCCTGTATGACATGTGCAAGGCTGTCAG CAGGGACATCGTGTTGGAGGAGATCAAGCTCATTAGCAAGACTGGTGGTCAGCGGGGGGA CTTCCATCGGGCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG AGGATCGAGATCT |