LARP1B ORF clone pFN21AE0048

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE0048

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Clone info.

Species

human

Clone Name

pFN21AE0048 Sequence (with vector) Restriction Map

Product ID

FHC05807

Flexi Clone PID

FXC05807

ORF Sequence

DNA sequence (1566 bp)
Protein sequence (522 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527177]

Gene

KIEE0048

Symbol

LARP1B

Alias : LARP2

Description

La ribonucleoprotein domain family, member 1B, transcript variant 2

Original Clone ID

oc00748

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1566 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 522 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3738.1 6e-139 100.0 LARP1B CCDS64057.1 4.3e-89 100.0 LARP1B CCDS47133.1 4.5e-89 100.0 LARP1B CCDS4328.1 1.2e-59 52.6 LARP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR006630 219 276 PF05383 RNA-binding protein Lupus La HMMSmart IPR006630 213 291 SM00715 RNA-binding protein Lupus La ProfileScan IPR006630 209 299 PS50961 RNA-binding protein Lupus La
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_006714839 891 612059 54.0 90.4 XP_011535920 891 612059 54.0 90.4 XP_005268465 891 612059 54.0 90.4 XP_005268464 891 612059 54.0 90.4 XP_006714838 955 612059 52.6 96.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE0048 Download

>KIEE0048  1566 bp
ATGGAGAATTGGCCAACACCAAGTGAATTAGTGAACACTGGATTTCAGAGCGTCCTCAGC
CAAGGAAATAAAAAGCCACAAAATAGAAAAGAAAAAGAAGAGAAGGTTGAAAAGAGAAGT
AACAGTGACAGCAAAGAAAACCGGGAAACAAAATTAAATGGTCCTGGTGAAAACGTCAGT
GAGGATGAGGCTCAGTCAAGTAATCAACGTAAGAGAGCTAATAAGCACAAGTGGGTACCA
CTCCACTTAGATGTTGTAAGATCAGAGAGTCAAGAAAGACCTGGATCCCGGAACAGCTCA
AGATGTCAACCTGAAGCAAATAAACCAACACATAACAATAGGAGAAATGATACACGAAGT
TGGAAGCGAGATAGAGAAAAAAGGGATGATCAAGATGACGTTTCCAGTGTGAGAAGTGAG
GGTGGTAATATCCGAGGTTCCTTTAGAGGTCGAGGAAGAGGCCGAGGACGGGGAAGAGGA
CGAGGCAGAGGAAATCCTCGATTGAACTTTGATTATTCATATGGTTATCAAGAACATGGT
GAAAGGACTGATCAACCATTTCAAACAGAACTTAATACCAGTATGATGTATTACTATGAT
GATGGTACAGGTGTACAGGTGTATCCTGTGGAAGAAGCATTGCTTAAAGAGTATATTAAG
CGTCAAATTGAATATTACTTCAGTGTAGAAAATTTGGAACGAGACTTCTTTCTTCGGGGA
AAGATGGATGAACAAGGTTTCTTGCCTATTTCCCTGATTGCTGGTTTTCAGCGTGTTCAG
GCTCTCACTACAAACCTTAATCTCATCTTAGAGGCACTGAAGGATAGCACAGAAGTAGAA
ATTGTGGATGAGAAAATGAGAAAAAAGATAGAACCAGAAAAATGGCCAATTCCAGGCCCT
CCTCCACGCAGTGTGCCACCAACAGACTTCTCTCAACTGATTGATTGTCCAGAGTTTGTA
CCAGGCCAAGCCTTTTGCTCACATACAGAGTCTGCCCCAAATTCTCCAAGAATTGGAAGC
CCATTGAGCCCAAAGAAAAACAGTGAAACAAGTATTCTTCAAGCAATGTCTAGAGGTTTG
TCTACCAGTTTGCCTGACTTGGACTCAGAACCTTGGATAGAAGTTAAAAAAAGACATCAG
CCAGCCCCAGTGAAATTGAGGGAATCAGTGTCTGTCCCTGAAGGGTCATTAAATCAGCTA
TGTTCTTCAGAAGAACCAGAACAAGAAGAACTTGATTTTTTGTTTGATGAAGAGATTGAA
CAAATAGGACGAAAAAACACATTTACTGATTGGTCTGATAATGATTCAGATTATGAAATT
GATGACCAAGACTTAAACAAGATTTTGATTGTAACTCAGACACCACCTTATGTGAAAAAA
CATCCTGGAGGAGATCGAACAGGCACCCACATGTCTCGGGCAAAAATCACATCTGAACTT
GCTAAAGTTATCAATGATGGCTTATACTATTATGAACAGGATCTATGGATGGAAGAAGAT
GAAAACAAACACACAGCCATAAAGGTAATTGTTTCTGGCCAACATCTTTCTACTGATGCT
TTGTTT

ORF Protein

Cloned ORF protein sequence for pFN21AE0048 Download

>KIEE0048  522 aa
MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS
EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS
WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG
ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG
KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP
PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL
STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE
QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL
AKVINDGLYYYEQDLWMEEDENKHTAIKVIVSGQHLSTDALF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE0048 Download

>pFN21AE0048  6271 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGAATTGGCCAACACCAAGTGAATTAGTGAA
CACTGGATTTCAGAGCGTCCTCAGCCAAGGAAATAAAAAGCCACAAAATAGAAAAGAAAA
AGAAGAGAAGGTTGAAAAGAGAAGTAACAGTGACAGCAAAGAAAACCGGGAAACAAAATT
AAATGGTCCTGGTGAAAACGTCAGTGAGGATGAGGCTCAGTCAAGTAATCAACGTAAGAG
AGCTAATAAGCACAAGTGGGTACCACTCCACTTAGATGTTGTAAGATCAGAGAGTCAAGA
AAGACCTGGATCCCGGAACAGCTCAAGATGTCAACCTGAAGCAAATAAACCAACACATAA
CAATAGGAGAAATGATACACGAAGTTGGAAGCGAGATAGAGAAAAAAGGGATGATCAAGA
TGACGTTTCCAGTGTGAGAAGTGAGGGTGGTAATATCCGAGGTTCCTTTAGAGGTCGAGG
AAGAGGCCGAGGACGGGGAAGAGGACGAGGCAGAGGAAATCCTCGATTGAACTTTGATTA
TTCATATGGTTATCAAGAACATGGTGAAAGGACTGATCAACCATTTCAAACAGAACTTAA
TACCAGTATGATGTATTACTATGATGATGGTACAGGTGTACAGGTGTATCCTGTGGAAGA
AGCATTGCTTAAAGAGTATATTAAGCGTCAAATTGAATATTACTTCAGTGTAGAAAATTT
GGAACGAGACTTCTTTCTTCGGGGAAAGATGGATGAACAAGGTTTCTTGCCTATTTCCCT
GATTGCTGGTTTTCAGCGTGTTCAGGCTCTCACTACAAACCTTAATCTCATCTTAGAGGC
ACTGAAGGATAGCACAGAAGTAGAAATTGTGGATGAGAAAATGAGAAAAAAGATAGAACC
AGAAAAATGGCCAATTCCAGGCCCTCCTCCACGCAGTGTGCCACCAACAGACTTCTCTCA
ACTGATTGATTGTCCAGAGTTTGTACCAGGCCAAGCCTTTTGCTCACATACAGAGTCTGC
CCCAAATTCTCCAAGAATTGGAAGCCCATTGAGCCCAAAGAAAAACAGTGAAACAAGTAT
TCTTCAAGCAATGTCTAGAGGTTTGTCTACCAGTTTGCCTGACTTGGACTCAGAACCTTG
GATAGAAGTTAAAAAAAGACATCAGCCAGCCCCAGTGAAATTGAGGGAATCAGTGTCTGT
CCCTGAAGGGTCATTAAATCAGCTATGTTCTTCAGAAGAACCAGAACAAGAAGAACTTGA
TTTTTTGTTTGATGAAGAGATTGAACAAATAGGACGAAAAAACACATTTACTGATTGGTC
TGATAATGATTCAGATTATGAAATTGATGACCAAGACTTAAACAAGATTTTGATTGTAAC
TCAGACACCACCTTATGTGAAAAAACATCCTGGAGGAGATCGAACAGGCACCCACATGTC
TCGGGCAAAAATCACATCTGAACTTGCTAAAGTTATCAATGATGGCTTATACTATTATGA
ACAGGATCTATGGATGGAAGAAGATGAAAACAAACACACAGCCATAAAGGTAATTGTTTC
TGGCCAACATCTTTCTACTGATGCTTTGTTTGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT