CDYL2 ORF clone pFN21AE1155

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Halotag ORF Clone pFN21AE1155

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Clone info.

Species

human

Clone Name

pFN21AE1155 Sequence (with vector) Restriction Map

Product ID

FHC28400

ORF Sequence

DNA sequence (1518 bp)
Protein sequence (506 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590934]

Gene

KIEE1155

Symbol

CDYL2

Alias : PCCP1

Description

chromodomain protein, Y-like 2

Original Clone ID

cs03028

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1518 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 506 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32493.1 4.6e-168 100.0 CDYL2 CCDS47364.1 4.4e-63 55.4 CDYL CCDS4491.2 5.6e-63 51.6 CDYL CCDS35473.1 1.8e-51 41.6 CDY2B CCDS14789.1 1.8e-51 41.6 CDY2A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR023780 7 56 PF00385 Chromo domain IPR001753 268 432 PF00378 Crotonase HMMSmart IPR000953 6 60 SM00298 Chromo domain/shadow ProfileScan IPR000953 7 67 PS50013 Chromo domain/shadow
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011513299 522 603778 51.6 99.8 NP_004815 544 603778 51.6 98.6 NP_004816 541 400018,415000 41.6 98.6 NP_733841 540 400016,415000 41.5 98.6 NP_004671 554 400016,415000 41.5 96.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE1155 Download

>KIEE1155  1518 bp
ATGGCTTCTGGGGACCTTTACGAGGTTGAAAGGATTGTAGACAAGAGGAAGAACAAGAAA
GGAAAATGGGAGTATCTTATCCGATGGAAAGGCTACGGGAGCACCGAGGACACGTGGGAG
CCGGAGCACCACCTCTTGCACTGTGAGGAGTTTATTGATGAATTCAATGGGCTGCACATG
TCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGAC
AGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAG
GGGACCTCCCATAAACGGAAGCGAATTAACCCTCCCCTGGCCAAGCCAAAAAAAGGGTAT
TCAGGCAAGCCCTCTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTTACAGGACTACC
CCCAGTGGTTTGCAAATAATGCCCCTGAAAAAGTCTCAGAACGGGATGGAAAATGGGGAC
GCCGGCTCTGAGAAGGATGAGAGGCACTTTGGAAATGGGTCCCATCAGCCTGGCTTGGAT
TTGAATGATCATGTTGGAGAGCAAGATATGGGTGAATGTGACGTGAATCACGCTACACTG
GCGGAGAACGGGCTCGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTG
AAGAGGAAGCTGGAAGCGGAGAAGGACTACGTCTTTGACAAAAGGCTCAGATACAGTGTC
CGCCAGAATGAAAGCAACTGTCGGTTTCGAGACATCGTTGTGCGGAAGGAAGAAGGGTTC
ACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACAATGCCCTGACACCTGAGATCATG
AAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTC
AGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATTCCTACCTAATTGGCCGGTTG
TCCAGCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAG
GCCTTTATCCAGTTTAAGAAGCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGGCCTG
GGTGCCTCCATCCTGCCCCTCTGTGACATCGTGTGGGCCAGTGAGAAGGCCTGGTTCCAG
ACGCCCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCTCCTCCTACACCTTCCCCCAG
ATCCTGGGCGTCGCGCTGGCCAATGAGATGCTGTTCTGTGGGCGGAAGCTCACCGCCCAG
GAGGCCTGCAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCACCACGTTCAGCCAGGAG
GTCATGCTGCGGGTCAAGGAGATGGCATCCTGCAGTGCCGTGGTGTTAGAGGAGTCCAAA
TGCCTCGTGCGGAGCTTCCTGAAATCAGTGCTGGAAGACGTGAACGAGAAGGAATGCCTC
ATGCTCAAGCAGCTCTGGAGCTCCTCCAAAGGCCTTGACTCCCTTTTCAGCTACCTGCAG
GACAAAATTTATGAAGTC

ORF Protein

Cloned ORF protein sequence for pFN21AE1155 Download

>KIEE1155  506 aa
MASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHM
SKDKRIKSGKQSSTSKLLRDSRGPSVEKLSHRPSDPGKSKGTSHKRKRINPPLAKPKKGY
SGKPSSGGDRATKTVSYRTTPSGLQIMPLKKSQNGMENGDAGSEKDERHFGNGSHQPGLD
LNDHVGEQDMGECDVNHATLAENGLGSALTNGGLNLHSPVKRKLEAEKDYVFDKRLRYSV
RQNESNCRFRDIVVRKEEGFTHILLSSQTSDNNALTPEIMKEVRRALCNAATDDSKLLLL
SAVGSVFCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKAFIQFKKPIVVAINGPALGL
GASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQILGVALANEMLFCGRKLTAQ
EACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKCLVRSFLKSVLEDVNEKECL
MLKQLWSSSKGLDSLFSYLQDKIYEV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE1155 Download

>pFN21AE1155  6223 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTTCTGGGGACCTTTACGAGGTTGAAAGGAT
TGTAGACAAGAGGAAGAACAAGAAAGGAAAATGGGAGTATCTTATCCGATGGAAAGGCTA
CGGGAGCACCGAGGACACGTGGGAGCCGGAGCACCACCTCTTGCACTGTGAGGAGTTTAT
TGATGAATTCAATGGGCTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTC
CAGTACCTCCAAGCTGCTGCGTGACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAG
ACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAATTAACCCTCC
CCTGGCCAAGCCAAAAAAAGGGTATTCAGGCAAGCCCTCTTCAGGAGGTGACAGGGCCAC
CAAGACGGTGTCTTACAGGACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAAAAAGTC
TCAGAACGGGATGGAAAATGGGGACGCCGGCTCTGAGAAGGATGAGAGGCACTTTGGAAA
TGGGTCCCATCAGCCTGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGATATGGGTGA
ATGTGACGTGAATCACGCTACACTGGCGGAGAACGGGCTCGGCTCTGCTCTGACCAACGG
GGGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTGGAAGCGGAGAAGGACTACGTCTT
TGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGACAT
CGTTGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAA
CAATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCAC
AGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGA
TTATTCCTACCTAATTGGCCGGTTGTCCAGCGACCGGCGAAAGGAGAGCACTCGGATTGC
AGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAGTTTAAGAAGCCTATCGTGGTGGC
CATCAATGGGCCGGCCCTGGGCCTGGGTGCCTCCATCCTGCCCCTCTGTGACATCGTGTG
GGCCAGTGAGAAGGCCTGGTTCCAGACGCCCTACGCCACCATCCGCCTCACGCCTGCTGG
CTGCTCCTCCTACACCTTCCCCCAGATCCTGGGCGTCGCGCTGGCCAATGAGATGCTGTT
CTGTGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGCAGGTCTT
CTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTGCAG
TGCCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAGCTTCCTGAAATCAGTGCTGGA
AGACGTGAACGAGAAGGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTCCAAAGGCCT
TGACTCCCTTTTCAGCTACCTGCAGGACAAAATTTATGAAGTCGTTTAAACGAATTCGGG
CTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTA
ACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAAC
CCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACC
ACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTA
TTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATG
TTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGT
GGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCC
CAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATG
GTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTT
CAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCC
TTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAA
GATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGT
AAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTT
CTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGC
ATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACG
GATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCG
GCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAAC
ATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTA
ACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGAT
AAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAA
TCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAG
CCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAAT
AGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGAC
CAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAAT
CAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTA
AAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAA
ATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTC
CCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGT
CCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCA
GTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCG
ACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTAT
CGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTA
CAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCT
GCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAAC
AAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAA
AAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAA
ACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTT
TATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCAT
GAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCA
TAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTG
TTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACA
ATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGC
AGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT