TBC1D17 ORF clone pFN21AE2039

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Halotag ORF Clone pFN21AE2039

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Clone info.

Species

human

Clone Name

pFN21AE2039 Sequence (with vector) Restriction Map

Product ID

FHC26751

ORF Sequence

DNA sequence (1944 bp)
Protein sequence (648 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB590884]

Gene

KIEE2039

Symbol

TBC1D17

Description

TBC1 domain family, member 17, transcript variant 1

Original Clone ID

cs02939

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1944 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 648 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12785.1 6.2e-165 99.8 TBC1D17 CCDS54294.1 2.7e-155 99.7 TBC1D17 CCDS53814.1 3.5e-52 48.5 TBC1D15 CCDS55849.1 3.6e-52 48.8 TBC1D15 CCDS31858.1 3.6e-52 47.5 TBC1D15 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR021935 5 218 PF12068 Protein of unknown function DUF3548 IPR000195 314 542 PF00566 Rab-GAP/TBC domain HMMSmart IPR000195 307 545 SM00164 Rab-GAP/TBC domain ProfileScan IPR000195 310 520 PS50086 Rab-GAP/TBC domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_078958 648 616659 99.8 100.0 NP_001161694 615 616659 99.7 94.0 XP_016875315 575 612662 51.5 83.2 XP_016875314 575 612662 51.5 83.2 XP_011536981 592 612662 50.0 83.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE2039 Download

>KIEE2039  1944 bp
ATGGAAGGAGCCGGCTACAGGGTGGTGTTTGAGAAGGGCGGAGTGTACCTGCACACCAGC
GCTAAGAAGTATCAGGACCGAGACTCTCTCATCGCTGGTGTCATCCGTGTCGTGGAAAAG
GACAATGACGTCCTCCTGCACTGGGCTCCTGTAGAGGAGGCTGGAGATTCCACCCAAATC
CTCTTCTCCAAGAAGGACTCCAGTGGGGGTGACTCATGTGCTTCTGAGGAGGAACCAACC
TTTGACCCCGGCTATGAACCTGACTGGGCTGTCATCAGCACTGTGCGGCCACAGCCCTGC
CACTCAGAGCCCACGAGAGGTGCAGAGCCCAGCTGCCCCCAGGGCTCCTGGGCCTTCTCA
GTGAGTCTGGGGGAGCTAAAGTCCATCCGCCGCTCCAAGCCAGGCCTCAGCTGGGCCTAC
CTGGTTCTGGTGACCCAGGCTGGAGGTTCCCTGCCCGCACTGCACTTCCACCGCGGGGGC
ACCCGCGCCCTGCTCCGCGTCCTCAGCCGCTACCTGCTGTTGGCCAGCTCCCCGCAGGAC
TCCCGCCTCTACCTTGTCTTCCCCCACGACTCCTCTGCTCTCTCCAACTCCTTCCACCAC
CTGCAGCTCTTTGACCAGGACAGCTCCAATGTGGTGTCACGCTTCCTCCAGGATCCCTAC
TCCACCACCTTCAGCAGCTTCTCCCGAGTGACCAACTTCTTCCGGGGTGCCCTGCAGCCA
CAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCCACCCGACGATGAGCCCGAGCCTGGA
TTCGAGGTCATTTCCTGTGTGGAGCTGGGGCCTCGGCCAACCGTGGAGCGGGGCCCTCCA
GTTACAGAGGAGGAGTGGGCACGCCACGTGGGCCCTGAAGGTCGCCTGCAGCAGGTCCCT
GAGCTGAAGAACCGGATCTTCTCGGGGGGTCTGAGCCCCAGCCTGCGGCGCGAGGCCTGG
AAGTTCCTCCTAGGGTACCTCAGCTGGGAAGGCACAGCTGAGGAGCACAAGGCCCACATA
CGCAAGAAAACGGATGAGTATTTCCGCATGAAGCTGCAGTGGAAATCTGTGAGCCCTGAG
CAGGAGCGGAGAAACTCACTTCTGCATGGATACCGCAGCCTCATCGAAAGGGATGTGAGC
CGCACTGACAGGACCAACAAGTTCTACGAGGGTCCCGAGAACCCGGGGCTGGGCCTGCTG
AACGATATCCTCCTCACCTACTGCATGTATCACTTCGACCTCGGCTACGTCCAGGGCATG
AGTGATCTTCTCTCCCCGATCCTCTACGTCATTCAGAACGAGGTGGATGCTTTCTGGTGT
TTCTGTGGCTTCATGGAGCTCGTGCAAGGGAACTTTGAAGAGAGCCAGGAGACCATGAAG
CGGCAACTCGGGCGACTGCTGCTGCTCCTGAGGGTGCTGGACCCCCTGCTCTGCGACTTC
CTGGATTCCCAGGACTCCGGCTCTCTCTGCTTCTGTTTCCGGTGGCTGCTCATCTGGTTC
AAGAGGGAATTCCCCTTCCCGGATGTCCTTCGGCTGTGGGAGGTGCTGTGGACAGGGCTC
CCTGGCCCCAATCTGCACCTGCTGGTGGCCTGCGCCATCCTGGACATGGAGAGGGACACC
CTCATGCTGTCCGGCTTCGGCTCCAATGAGATCCTCAAGCACATCAACGAGCTGACTATG
AAGCTGAGCGTGGAGGACGTGCTGACCCGCGCCGAGGCCCTGCACCGCCAGCTAACCGCC
TGCCCCGAGCTGCCCCACAACGTGCAGGAGATCCTGGGGCTGGCCCCGCCCGCAGAGCCC
CACAGCCCCTCGCCCACCGCCTCCCCGCTGCCTCTGTCGCCCACCCGGGCCCCGCCCACC
CCGCCGCCCTCCACGGACACAGCCCCGCAGCCCGACAGCAGCCTGGAGATCCTGCCCGAG
GAGGAGGACGAGGGCGCCGACTCC

ORF Protein

Cloned ORF protein sequence for pFN21AE2039 Download

>KIEE2039  648 aa
MEGAGYRVVFEKGGVYLHTSAKKYQDRDSLIAGVIRVVEKDNDVLLHWAPVEEAGDSTQI
LFSKKDSSGGDSCASEEEPTFDPGYEPDWAVISTVRPQPCHSEPTRGAEPSCPQGSWAFS
VSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGTRALLRVLSRYLLLASSPQD
SRLYLVFPHDSSALSNSFHHLQLFDQDSSNVVSRFLQDPYSTTFSSFSRVTNFFRGALQP
QPEGAASDLPPPPDDEPEPGFEVISCVELGPRPTVERGPPVTEEEWARHVGPEGRLQQVP
ELKNRIFSGGLSPSLRREAWKFLLGYLSWEGTAEEHKAHIRKKTDEYFRMKLQWKSVSPE
QERRNSLLHGYRSLIERDVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQGM
SDLLSPILYVIQNEVDAFWCFCGFMELVQGNFEESQETMKRQLGRLLLLLRVLDPLLCDF
LDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPNLHLLVACAILDMERDT
LMLSGFGSNEILKHINELTMKLSVEDVLTRAEALHRQLTACPELPHNVQEILGLAPPAEP
HSPSPTASPLPLSPTRAPPTPPPSTDTAPQPDSSLEILPEEEDEGADS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE2039 Download

>pFN21AE2039  6649 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAAGGAGCCGGCTACAGGGTGGTGTTTGAGAA
GGGCGGAGTGTACCTGCACACCAGCGCTAAGAAGTATCAGGACCGAGACTCTCTCATCGC
TGGTGTCATCCGTGTCGTGGAAAAGGACAATGACGTCCTCCTGCACTGGGCTCCTGTAGA
GGAGGCTGGAGATTCCACCCAAATCCTCTTCTCCAAGAAGGACTCCAGTGGGGGTGACTC
ATGTGCTTCTGAGGAGGAACCAACCTTTGACCCCGGCTATGAACCTGACTGGGCTGTCAT
CAGCACTGTGCGGCCACAGCCCTGCCACTCAGAGCCCACGAGAGGTGCAGAGCCCAGCTG
CCCCCAGGGCTCCTGGGCCTTCTCAGTGAGTCTGGGGGAGCTAAAGTCCATCCGCCGCTC
CAAGCCAGGCCTCAGCTGGGCCTACCTGGTTCTGGTGACCCAGGCTGGAGGTTCCCTGCC
CGCACTGCACTTCCACCGCGGGGGCACCCGCGCCCTGCTCCGCGTCCTCAGCCGCTACCT
GCTGTTGGCCAGCTCCCCGCAGGACTCCCGCCTCTACCTTGTCTTCCCCCACGACTCCTC
TGCTCTCTCCAACTCCTTCCACCACCTGCAGCTCTTTGACCAGGACAGCTCCAATGTGGT
GTCACGCTTCCTCCAGGATCCCTACTCCACCACCTTCAGCAGCTTCTCCCGAGTGACCAA
CTTCTTCCGGGGTGCCCTGCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCC
ACCCGACGATGAGCCCGAGCCTGGATTCGAGGTCATTTCCTGTGTGGAGCTGGGGCCTCG
GCCAACCGTGGAGCGGGGCCCTCCAGTTACAGAGGAGGAGTGGGCACGCCACGTGGGCCC
TGAAGGTCGCCTGCAGCAGGTCCCTGAGCTGAAGAACCGGATCTTCTCGGGGGGTCTGAG
CCCCAGCCTGCGGCGCGAGGCCTGGAAGTTCCTCCTAGGGTACCTCAGCTGGGAAGGCAC
AGCTGAGGAGCACAAGGCCCACATACGCAAGAAAACGGATGAGTATTTCCGCATGAAGCT
GCAGTGGAAATCTGTGAGCCCTGAGCAGGAGCGGAGAAACTCACTTCTGCATGGATACCG
CAGCCTCATCGAAAGGGATGTGAGCCGCACTGACAGGACCAACAAGTTCTACGAGGGTCC
CGAGAACCCGGGGCTGGGCCTGCTGAACGATATCCTCCTCACCTACTGCATGTATCACTT
CGACCTCGGCTACGTCCAGGGCATGAGTGATCTTCTCTCCCCGATCCTCTACGTCATTCA
GAACGAGGTGGATGCTTTCTGGTGTTTCTGTGGCTTCATGGAGCTCGTGCAAGGGAACTT
TGAAGAGAGCCAGGAGACCATGAAGCGGCAACTCGGGCGACTGCTGCTGCTCCTGAGGGT
GCTGGACCCCCTGCTCTGCGACTTCCTGGATTCCCAGGACTCCGGCTCTCTCTGCTTCTG
TTTCCGGTGGCTGCTCATCTGGTTCAAGAGGGAATTCCCCTTCCCGGATGTCCTTCGGCT
GTGGGAGGTGCTGTGGACAGGGCTCCCTGGCCCCAATCTGCACCTGCTGGTGGCCTGCGC
CATCCTGGACATGGAGAGGGACACCCTCATGCTGTCCGGCTTCGGCTCCAATGAGATCCT
CAAGCACATCAACGAGCTGACTATGAAGCTGAGCGTGGAGGACGTGCTGACCCGCGCCGA
GGCCCTGCACCGCCAGCTAACCGCCTGCCCCGAGCTGCCCCACAACGTGCAGGAGATCCT
GGGGCTGGCCCCGCCCGCAGAGCCCCACAGCCCCTCGCCCACCGCCTCCCCGCTGCCTCT
GTCGCCCACCCGGGCCCCGCCCACCCCGCCGCCCTCCACGGACACAGCCCCGCAGCCCGA
CAGCAGCCTGGAGATCCTGCCCGAGGAGGAGGACGAGGGCGCCGACTCCGTTTAAACGAA
TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG
CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG
CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA
CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT
GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT
TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC
AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG
ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC
GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA
ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT
ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA
GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC
AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC
AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT
CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT
CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG
CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC
ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA
CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG
GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT
GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT
GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG
ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA
CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA
ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC
ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG
CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT
ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT
ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC
AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG
ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG
GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG
GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG
GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA
GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA
ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA
TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA
AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG
GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT
GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG
CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA
AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT