TRIM77 ORF clone pFN21AE3562

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE3562

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Clone info.

Species

human

Clone Name

pFN21AE3562 Sequence (with vector) Restriction Map

Product ID

FHC12582

ORF Sequence

DNA sequence (1350 bp)
Protein sequence (450 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE3562

Symbol

TRIM77

Alias : TRIM77P

Description

tripartite motif containing 77, transcript variant 1

Original Clone ID

cp93562

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1350 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 450 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS60929.1 6e-129 100.0 TRIM77 CCDS2015.1 8.6e-58 48.1 TRIM43 CCDS55762.1 1.5e-47 44.2 TRIM49B CCDS73287.1 4.8e-47 40.8 TRIM64C CCDS53694.1 7.2e-47 43.3 TRIM49C The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 285 302 PR01407 Butyrophylin-like IPR003879 323 347 PR01407 Butyrophylin-like IPR003879 353 366 PR01407 Butyrophylin-like IPR003879 398 422 PR01407 Butyrophylin-like IPR003879 429 447 PR01407 Butyrophylin-like HMMPfam IPR003877 338 447 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 15 55 SM00184 Zinc finger IPR000315 88 129 SM00336 Zinc finger ProfileScan IPR001841 15 56 PS50089 Zinc finger IPR000315 88 131 PS50119 Zinc finger IPR001870 269 450 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065091 452 606124 43.3 99.1 NP_003132 475 109092 31.0 99.6 XP_016873516 375 606124 36.2 99.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE3562 Download

>KIEE3562  1350 bp
ATGGCTTCTGCTATCACGCAGTGTTCTACCAGTGAGCTCACCTGCTCGATCTGCACAGAC
TATTTGACAGACCCTGTCACCATTTGTTGTGGGCACAGATTTTGTAGTCCCTGTCTCTGC
CTCTTGTGGGAAGATACACTAACTCCTAATTGCTGCCCTGTGTGCAGGGAAATATCACAG
CAAATGTACTTCAAACGCATTATTTTTGCTGAGAAACAAGTTATTCCTACAAGAGAATCA
GTCCCCTGCCAGTTATCAAGCTCTGCCATGCTGATCTGTAGGAGACACCAGGAAATCAAG
AACCTCATCTGTGAAACTGATAGGAGCCTGCTGTGTTTTCTATGCTCTCAATCCCCAAGG
CATGCTACTCACAAACACTATATGACAAGGGAGGCTGATGAATACTATAGGAAGAAACTC
CTGATTCAAATGAAGTCCATCTGGAAAAAAAAACAGAAAAATCAAAGAAATCTAAACAGA
GAGACCAACATAATCGGAACATGGGAAGTTTTTATAAATTTGCGGAGCATGATGATCAGT
GCTGAATATCCTAAGGTGTGTCAATACCTCCGTGAAGAAGAGCAAAAGCACGTAGAGAGC
CTGGCAAGAGAAGGCAGGATAATTTTTCAGCAACTCAAGAGAAGTCAAACTAGAATGGCT
AAGATGGGTATACTCCTGAGAGAAATGTATGAGAAACTGAAGGAAATGAGCTGTAAAGCA
GATGTGAACCTGCCTCAGGATTTGGGAGACGTAATGAAAAGGAATGAGTTTCTGAGGCTG
GCCATGCCTCAGCCTGTGAACCCACAGCTCAGTGCATGGACCATCACTGGGGTGTCAGAA
AGGCTTAACTTCTTCAGAGTGTATATCACCTTGGATCGTAAGATATGCAGTAATCACAAG
CTTCTGTTCGAAGACCTAAGGCATTTGCAGTGCAGCCTTGATGATACAGACATGTCCTGT
AATCCAACAAGTACACAGTATACTTCTTCATGGGGAGCTCAGATCCTCAGCTCTGGCAAA
CATTACTGGGAGGTGGATGTGAAAGACTCTTGTAATTGGGTTATAGGACTTTGCAGAGAA
GCCTGGACAAAGAGGAATGACATGCGACTTGACTCTGAGGGTATCTTTCTACTCCTGTGT
CTCAAAGTGGATGACCATTTCAGTCTCTTCTCTACCTCCCCACTGTTACCTCACTATATT
CCAAGGCCCCAAGGCTGGCTAGGGGTGTTCCTGGATTATGAATGTGGGATAGTGAGCTTT
GTTAATGTTGCCCAAAGTTCCCTCATTTGTAGTTTCCTCTCACGCATCTTCTATTTTCCT
CTCAGACCTTTCATTTGCCACGGATCTAAA

ORF Protein

Cloned ORF protein sequence for pFN21AE3562 Download

>KIEE3562  450 aa
MASAITQCSTSELTCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREISQ
QMYFKRIIFAEKQVIPTRESVPCQLSSSAMLICRRHQEIKNLICETDRSLLCFLCSQSPR
HATHKHYMTREADEYYRKKLLIQMKSIWKKKQKNQRNLNRETNIIGTWEVFINLRSMMIS
AEYPKVCQYLREEEQKHVESLAREGRIIFQQLKRSQTRMAKMGILLREMYEKLKEMSCKA
DVNLPQDLGDVMKRNEFLRLAMPQPVNPQLSAWTITGVSERLNFFRVYITLDRKICSNHK
LLFEDLRHLQCSLDDTDMSCNPTSTQYTSSWGAQILSSGKHYWEVDVKDSCNWVIGLCRE
AWTKRNDMRLDSEGIFLLLCLKVDDHFSLFSTSPLLPHYIPRPQGWLGVFLDYECGIVSF
VNVAQSSLICSFLSRIFYFPLRPFICHGSK

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE3562 Download

>pFN21AE3562  6055 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTTCTGCTATCACGCAGTGTTCTACCAGTGA
GCTCACCTGCTCGATCTGCACAGACTATTTGACAGACCCTGTCACCATTTGTTGTGGGCA
CAGATTTTGTAGTCCCTGTCTCTGCCTCTTGTGGGAAGATACACTAACTCCTAATTGCTG
CCCTGTGTGCAGGGAAATATCACAGCAAATGTACTTCAAACGCATTATTTTTGCTGAGAA
ACAAGTTATTCCTACAAGAGAATCAGTCCCCTGCCAGTTATCAAGCTCTGCCATGCTGAT
CTGTAGGAGACACCAGGAAATCAAGAACCTCATCTGTGAAACTGATAGGAGCCTGCTGTG
TTTTCTATGCTCTCAATCCCCAAGGCATGCTACTCACAAACACTATATGACAAGGGAGGC
TGATGAATACTATAGGAAGAAACTCCTGATTCAAATGAAGTCCATCTGGAAAAAAAAACA
GAAAAATCAAAGAAATCTAAACAGAGAGACCAACATAATCGGAACATGGGAAGTTTTTAT
AAATTTGCGGAGCATGATGATCAGTGCTGAATATCCTAAGGTGTGTCAATACCTCCGTGA
AGAAGAGCAAAAGCACGTAGAGAGCCTGGCAAGAGAAGGCAGGATAATTTTTCAGCAACT
CAAGAGAAGTCAAACTAGAATGGCTAAGATGGGTATACTCCTGAGAGAAATGTATGAGAA
ACTGAAGGAAATGAGCTGTAAAGCAGATGTGAACCTGCCTCAGGATTTGGGAGACGTAAT
GAAAAGGAATGAGTTTCTGAGGCTGGCCATGCCTCAGCCTGTGAACCCACAGCTCAGTGC
ATGGACCATCACTGGGGTGTCAGAAAGGCTTAACTTCTTCAGAGTGTATATCACCTTGGA
TCGTAAGATATGCAGTAATCACAAGCTTCTGTTCGAAGACCTAAGGCATTTGCAGTGCAG
CCTTGATGATACAGACATGTCCTGTAATCCAACAAGTACACAGTATACTTCTTCATGGGG
AGCTCAGATCCTCAGCTCTGGCAAACATTACTGGGAGGTGGATGTGAAAGACTCTTGTAA
TTGGGTTATAGGACTTTGCAGAGAAGCCTGGACAAAGAGGAATGACATGCGACTTGACTC
TGAGGGTATCTTTCTACTCCTGTGTCTCAAAGTGGATGACCATTTCAGTCTCTTCTCTAC
CTCCCCACTGTTACCTCACTATATTCCAAGGCCCCAAGGCTGGCTAGGGGTGTTCCTGGA
TTATGAATGTGGGATAGTGAGCTTTGTTAATGTTGCCCAAAGTTCCCTCATTTGTAGTTT
CCTCTCACGCATCTTCTATTTTCCTCTCAGACCTTTCATTTGCCACGGATCTAAAGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT