TRIM10 ORF clone pFN21AE4110

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4110

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Clone info.

Species

human

Clone Name

pFN21AE4110 Sequence (with vector) Restriction Map

Product ID

FHC22534

ORF Sequence

DNA sequence (1443 bp)
Protein sequence (481 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4110

Symbol

TRIM10

Alias : HERF1, RFB30, RNF9

Description

tripartite motif containing 10, transcript variant 1

Original Clone ID

cp94110

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1443 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 481 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS34375.1 5.2e-130 100.0 TRIM10 CCDS4676.1 3.8e-99 97.4 TRIM10 CCDS4677.1 1.1e-43 43.1 TRIM15 CCDS4678.1 6.7e-32 37.0 TRIM26 CCDS31356.1 6.1e-28 34.6 TRIM68 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 308 325 PR01407 Butyrophylin-like IPR003879 325 342 PR01407 Butyrophylin-like IPR003879 347 371 PR01407 Butyrophylin-like IPR003879 379 392 PR01407 Butyrophylin-like IPR003879 422 446 PR01407 Butyrophylin-like IPR003879 452 470 PR01407 Butyrophylin-like HMMPfam IPR018957 16 60 PF00097 Zinc finger IPR000315 95 132 PF00643 Zinc finger IPR003877 363 476 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 16 60 SM00184 Zinc finger IPR000315 94 135 SM00336 Zinc finger IPR006574 309 361 SM00589 SPRY-associated IPR018355 362 480 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 16 61 PS50089 Zinc finger IPR000315 94 135 PS50119 Zinc finger IPR001870 292 481 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_006769 481 605701 100.0 100.0 XP_011512523 499 605701 100.0 95.8 XP_011512524 499 605701 100.0 95.8 XP_011512525 499 605701 100.0 95.8 XP_005249434 539 600830 37.0 95.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4110 Download

>KIEE4110  1443 bp
ATGGCCTCTGCTGCCTCTGTGACCAGCCTGGCAGATGAAGTCAACTGCCCCATCTGTCAG
GGTACCCTGAGGGAGCCGGTCACTATCGACTGCGGCCACAACTTCTGCCGGGCCTGCCTT
ACCCGCTACTGTGAGATACCAGGCCCAGACCTGGAGGAGTCCCCTACTTGCCCACTCTGC
AAAGAACCCTTCCGTCCTGGGAGCTTCCGGCCCAACTGGCAGCTGGCTAACGTGGTGGAG
AACATTGAGCGCCTCCAGCTGGTGTCCACACTGGGTTTGGGAGAGGAGGATGTCTGCCAA
GAGCACGGAGAGAAGATCTACTTCTTCTGTGAGGATGATGAGATGCAGTTGTGCGTGGTG
TGCCGGGAGGCTGGGGAGCACGCTACCCACACCATGCGCTTCCTGGAGGATGCAGCGGCT
CCCTATAGGGAACAAATCCATAAGTGTCTTAAATGTCTAAGAAAAGAGAGAGAGGAGATT
CAAGAAATCCAGTCAAGAGAAAATAAAAGGATGCAAGTCCTCCTGACTCAGGTGTCCACC
AAGAGACAACAGGTGATTTCTGAGTTCGCACACCTGAGGAAGTTTCTAGAGGAACAGCAG
AGCATCCTCTTAGCACAATTGGAGAGCCAGGATGGGGACATCTTGAGGCAACGGGATGAA
TTTGATTTGCTGGTTGCTGGGGAGATCTGCCGGTTTAGTGCTCTTATTGAAGAACTGGAG
GAGAAGAATGAGAGGCCAGCAAGGGAGCTCCTGACGGACATCAGAAGCACTCTAATAAGA
TGTGAAACCAGAAAGTGCCGGAAACCGGTGGCTGTGTCGCCAGAGCTGGGCCAGAGGATT
CGGGACTTTCCCCAGCAGGCCCTCCCGCTGCAGAGGGAGATGAAGATGTTTCTGGAAAAA
CTATGCTTTGAGTTGGACTATGAGCCAGCTCACATTTCTCTAGACCCTCAGACTTCCCAC
CCCAAGCTCCTCTTGTCCGAGGACCACCAGCGAGCTCAGTTCTCCTACAAATGGCAGAAC
TCACCAGACAACCCCCAGCGTTTTGACCGGGCCACCTGTGTTCTGGCCCACACTGGCATC
ACAGGGGGGAGACACACGTGGGTGGTGAGTATAGACCTGGCCCATGGGGGCAGCTGCACC
GTGGGCGTGGTGAGCGAGGATGTGCAGCGGAAGGGGGAGCTTCGGCTGCGGCCAGAGGAG
GGGGTGTGGGCTGTGAGGCTGGCTTGGGGCTTCGTCTCGGCTCTGGGCTCCTTCCCCACA
CGGCTGACCCTGAAGGAGCAGCCCCGGCAGGTGAGGGTGTCTCTTGACTATGAGGTGGGC
TGGGTGACCTTCACCAACGCTGTCACCCGAGAGCCCATCTACACCTTCACTGCCTCCTTC
ACTAGGAAGGTCATTCCCTTCTTTGGGCTCTGGGGCCGAGGGTCCAGTTTCTCCCTGAGC
TCC

ORF Protein

Cloned ORF protein sequence for pFN21AE4110 Download

>KIEE4110  481 aa
MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLC
KEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCVV
CREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVST
KRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEELE
EKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLEK
LCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPDNPQRFDRATCVLAHTGI
TGGRHTWVVSIDLAHGGSCTVGVVSEDVQRKGELRLRPEEGVWAVRLAWGFVSALGSFPT
RLTLKEQPRQVRVSLDYEVGWVTFTNAVTREPIYTFTASFTRKVIPFFGLWGRGSSFSLS
S

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4110 Download

>pFN21AE4110  6148 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCTCTGCTGCCTCTGTGACCAGCCTGGCAGA
TGAAGTCAACTGCCCCATCTGTCAGGGTACCCTGAGGGAGCCGGTCACTATCGACTGCGG
CCACAACTTCTGCCGGGCCTGCCTTACCCGCTACTGTGAGATACCAGGCCCAGACCTGGA
GGAGTCCCCTACTTGCCCACTCTGCAAAGAACCCTTCCGTCCTGGGAGCTTCCGGCCCAA
CTGGCAGCTGGCTAACGTGGTGGAGAACATTGAGCGCCTCCAGCTGGTGTCCACACTGGG
TTTGGGAGAGGAGGATGTCTGCCAAGAGCACGGAGAGAAGATCTACTTCTTCTGTGAGGA
TGATGAGATGCAGTTGTGCGTGGTGTGCCGGGAGGCTGGGGAGCACGCTACCCACACCAT
GCGCTTCCTGGAGGATGCAGCGGCTCCCTATAGGGAACAAATCCATAAGTGTCTTAAATG
TCTAAGAAAAGAGAGAGAGGAGATTCAAGAAATCCAGTCAAGAGAAAATAAAAGGATGCA
AGTCCTCCTGACTCAGGTGTCCACCAAGAGACAACAGGTGATTTCTGAGTTCGCACACCT
GAGGAAGTTTCTAGAGGAACAGCAGAGCATCCTCTTAGCACAATTGGAGAGCCAGGATGG
GGACATCTTGAGGCAACGGGATGAATTTGATTTGCTGGTTGCTGGGGAGATCTGCCGGTT
TAGTGCTCTTATTGAAGAACTGGAGGAGAAGAATGAGAGGCCAGCAAGGGAGCTCCTGAC
GGACATCAGAAGCACTCTAATAAGATGTGAAACCAGAAAGTGCCGGAAACCGGTGGCTGT
GTCGCCAGAGCTGGGCCAGAGGATTCGGGACTTTCCCCAGCAGGCCCTCCCGCTGCAGAG
GGAGATGAAGATGTTTCTGGAAAAACTATGCTTTGAGTTGGACTATGAGCCAGCTCACAT
TTCTCTAGACCCTCAGACTTCCCACCCCAAGCTCCTCTTGTCCGAGGACCACCAGCGAGC
TCAGTTCTCCTACAAATGGCAGAACTCACCAGACAACCCCCAGCGTTTTGACCGGGCCAC
CTGTGTTCTGGCCCACACTGGCATCACAGGGGGGAGACACACGTGGGTGGTGAGTATAGA
CCTGGCCCATGGGGGCAGCTGCACCGTGGGCGTGGTGAGCGAGGATGTGCAGCGGAAGGG
GGAGCTTCGGCTGCGGCCAGAGGAGGGGGTGTGGGCTGTGAGGCTGGCTTGGGGCTTCGT
CTCGGCTCTGGGCTCCTTCCCCACACGGCTGACCCTGAAGGAGCAGCCCCGGCAGGTGAG
GGTGTCTCTTGACTATGAGGTGGGCTGGGTGACCTTCACCAACGCTGTCACCCGAGAGCC
CATCTACACCTTCACTGCCTCCTTCACTAGGAAGGTCATTCCCTTCTTTGGGCTCTGGGG
CCGAGGGTCCAGTTTCTCCCTGAGCTCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT