TRIM26 ORF clone pFN21AE4134

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Halotag ORF Clone pFN21AE4134

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Clone info.

Species

human

Clone Name

pFN21AE4134 Sequence (with vector) Restriction Map

Product ID

FHC22535

ORF Sequence

DNA sequence (1617 bp)
Protein sequence (539 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4134

Symbol

TRIM26

Alias : AFP, RNF95, ZNF173

Description

tripartite motif containing 26

Original Clone ID

cp94134

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1617 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 539 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4678.1 3.1e-109 100.0 TRIM26 CCDS34375.1 2.3e-23 37.4 TRIM10 CCDS4676.1 3.4e-23 38.8 TRIM10 CCDS34374.1 5.4e-15 34.7 TRIM31 CCDS31390.1 5.9e-15 29.7 TRIM6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR003879 311 328 PR01407 Butyrophylin-like IPR003879 328 345 PR01407 Butyrophylin-like IPR003879 350 374 PR01407 Butyrophylin-like IPR003879 437 450 PR01407 Butyrophylin-like IPR003879 480 504 PR01407 Butyrophylin-like IPR003879 510 528 PR01407 Butyrophylin-like HMMPfam IPR018957 16 56 PF00097 Zinc finger IPR000315 99 136 PF00643 Zinc finger IPR003877 432 533 PF00622 SPla/RYanodine receptor SPRY HMMSmart IPR001841 16 56 SM00184 Zinc finger IPR000315 97 138 SM00336 Zinc finger IPR006574 312 364 SM00589 SPRY-associated IPR018355 365 539 SM00449 SPla/RYanodine receptor subgroup ProfileScan IPR001841 16 57 PS50089 Zinc finger IPR000315 97 138 PS50119 Zinc finger IPR001870 295 539 PS50188 B302/SPRY domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005249431 539 600830 100.0 100.0 XP_005249432 539 600830 100.0 100.0 XP_005249434 539 600830 100.0 100.0 XP_005249433 539 600830 100.0 100.0 NP_001229712 539 600830 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4134 Download

>KIEE4134  1617 bp
ATGGCCACGTCAGCCCCACTACGGAGCCTGGAAGAGGAGGTGACCTGCTCCATCTGTCTT
GATTACCTGCGGGACCCTGTGACCATTGACTGTGGCCACGTCTTCTGCCGCAGCTGCACC
ACAGACGTCCGCCCCATCTCAGGGAGCCGCCCCGTCTGCCCACTCTGCAAGAAGCCTTTT
AAGAAGGAGAACATCCGACCCGTGTGGCAACTGGCCAGCCTGGTGGAGAACATTGAGCGG
CTGAAGGTGGACAAGGGCAGGCAGCCGGGAGAGGTGACCCGGGAGCAGCAGGATGCAAAG
TTGTGCGAGCGACACCGAGAGAAGCTGCACTACTACTGTGAGGACGACGGGAAGCTGCTG
TGCGTGATGTGCCGGGAGTCCCGGGAGCACAGGCCCCACACGGCCGTCCTCATGGAGAAG
GCCGCCCAGCCCCACAGGGAAAAAATCCTGAACCACCTGAGTACCCTAAGGAGAGACAGA
GACAAAATTCAGGGCTTCCAGGCAAAGGGAGAAGCTGATATCCTGGCCGCGCTGAAGAAG
CTCCAGGACCAGAGGCAGTACATTGTGGCTGAGTTTGAGCAGGGTCATCAGTTCCTGAGG
GAGCGGGAGGAACACCTGCTGGAACAGCTGGCGAAGCTGGAGCAGGAGCTCACGGAGGGC
AGGGAGAAGTTCAAGAGCCGGGGCGTCGGGGAGCTTGCCCGGCTGGCCCTGGTCATCTCC
GAACTGGAGGGCAAGGCGCAGCAGCCAGCTGCAGAGCTCATGCAGGACACGAGAGACTTC
CTAAACAGGTATCCACGGAAGAAGTTCTGGGTTGGGAAACCCATTGCTCGAGTGGTTAAA
AAAAAGACCGGAGAATTCTCAGATAAACTCCTCTCTCTGCAACGAGGCCTGAGGGAATTC
CAGGGGAAGCTGCTGAGAGACTTGGAATATAAGACAGTGAGCGTCACCCTGGACCCACAG
TCGGCCAGTGGGTACCTGCAGCTGTCAGAGGACTGGAAGTGCGTGACCTACACCAGCCTG
TACAAGAGTGCCTACCTGCACCCCCAGCAGTTTGACTGTGAGCCTGGGGTGCTGGGCAGC
AAGGGCTTCACCTGGGGCAAGGTCTACTGGGAAGTGGAAGTGGAGAGGGAGGGCTGGTCT
GAGGATGAAGAAGAGGGGGATGAGGAGGAAGAGGGAGAAGAGGAGGAGGAGGAAGAGGAG
GCCGGCTATGGGGATGGATATGACGACTGGGAAACGGACGAAGATGAGGAATCGTTGGGC
GATGAAGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGTTCTGGAAAGCTGCATGGTGGGG
GTGGCTAGAGACTCTGTGAAGAGGAAGGGAGACCTCTCCCTGCGGCCAGAGGATGGCGTG
TGGGCGCTGCGCCTCTCCTCCTCCGGCATCTGGGCCAACACCAGCCCCGAGGCTGAGCTT
TTCCCAGCACTGCGGCCCCGGAGAGTGGGCATCGCCCTGGATTATGAAGGGGGCACCGTG
ACTTTCACCAACGCAGAGTCACAGGAACTCATCTACACCTTCACTGCCACCTTCACCCGG
CGCCTGGTCCCCTTCCTGTGGCTCAAGTGGCCAGGAACACGCCTCCTGCTAAGACCC

ORF Protein

Cloned ORF protein sequence for pFN21AE4134 Download

>KIEE4134  539 aa
MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPF
KKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLL
CVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEADILAALKK
LQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGELARLALVIS
ELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIARVVKKKTGEFSDKLLSLQRGLREF
QGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLHPQQFDCEPGVLGS
KGFTWGKVYWEVEVEREGWSEDEEEGDEEEEGEEEEEEEEAGYGDGYDDWETDEDEESLG
DEEEEEEEEEEEVLESCMVGVARDSVKRKGDLSLRPEDGVWALRLSSSGIWANTSPEAEL
FPALRPRRVGIALDYEGGTVTFTNAESQELIYTFTATFTRRLVPFLWLKWPGTRLLLRP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4134 Download

>pFN21AE4134  6322 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCACGTCAGCCCCACTACGGAGCCTGGAAGA
GGAGGTGACCTGCTCCATCTGTCTTGATTACCTGCGGGACCCTGTGACCATTGACTGTGG
CCACGTCTTCTGCCGCAGCTGCACCACAGACGTCCGCCCCATCTCAGGGAGCCGCCCCGT
CTGCCCACTCTGCAAGAAGCCTTTTAAGAAGGAGAACATCCGACCCGTGTGGCAACTGGC
CAGCCTGGTGGAGAACATTGAGCGGCTGAAGGTGGACAAGGGCAGGCAGCCGGGAGAGGT
GACCCGGGAGCAGCAGGATGCAAAGTTGTGCGAGCGACACCGAGAGAAGCTGCACTACTA
CTGTGAGGACGACGGGAAGCTGCTGTGCGTGATGTGCCGGGAGTCCCGGGAGCACAGGCC
CCACACGGCCGTCCTCATGGAGAAGGCCGCCCAGCCCCACAGGGAAAAAATCCTGAACCA
CCTGAGTACCCTAAGGAGAGACAGAGACAAAATTCAGGGCTTCCAGGCAAAGGGAGAAGC
TGATATCCTGGCCGCGCTGAAGAAGCTCCAGGACCAGAGGCAGTACATTGTGGCTGAGTT
TGAGCAGGGTCATCAGTTCCTGAGGGAGCGGGAGGAACACCTGCTGGAACAGCTGGCGAA
GCTGGAGCAGGAGCTCACGGAGGGCAGGGAGAAGTTCAAGAGCCGGGGCGTCGGGGAGCT
TGCCCGGCTGGCCCTGGTCATCTCCGAACTGGAGGGCAAGGCGCAGCAGCCAGCTGCAGA
GCTCATGCAGGACACGAGAGACTTCCTAAACAGGTATCCACGGAAGAAGTTCTGGGTTGG
GAAACCCATTGCTCGAGTGGTTAAAAAAAAGACCGGAGAATTCTCAGATAAACTCCTCTC
TCTGCAACGAGGCCTGAGGGAATTCCAGGGGAAGCTGCTGAGAGACTTGGAATATAAGAC
AGTGAGCGTCACCCTGGACCCACAGTCGGCCAGTGGGTACCTGCAGCTGTCAGAGGACTG
GAAGTGCGTGACCTACACCAGCCTGTACAAGAGTGCCTACCTGCACCCCCAGCAGTTTGA
CTGTGAGCCTGGGGTGCTGGGCAGCAAGGGCTTCACCTGGGGCAAGGTCTACTGGGAAGT
GGAAGTGGAGAGGGAGGGCTGGTCTGAGGATGAAGAAGAGGGGGATGAGGAGGAAGAGGG
AGAAGAGGAGGAGGAGGAAGAGGAGGCCGGCTATGGGGATGGATATGACGACTGGGAAAC
GGACGAAGATGAGGAATCGTTGGGCGATGAAGAGGAAGAAGAGGAGGAGGAAGAGGAGGA
AGTTCTGGAAAGCTGCATGGTGGGGGTGGCTAGAGACTCTGTGAAGAGGAAGGGAGACCT
CTCCCTGCGGCCAGAGGATGGCGTGTGGGCGCTGCGCCTCTCCTCCTCCGGCATCTGGGC
CAACACCAGCCCCGAGGCTGAGCTTTTCCCAGCACTGCGGCCCCGGAGAGTGGGCATCGC
CCTGGATTATGAAGGGGGCACCGTGACTTTCACCAACGCAGAGTCACAGGAACTCATCTA
CACCTTCACTGCCACCTTCACCCGGCGCCTGGTCCCCTTCCTGTGGCTCAAGTGGCCAGG
AACACGCCTCCTGCTAAGACCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT