TRIM55 ORF clone pFN21AE4137

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4137

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Clone info.

Species

human

Clone Name

pFN21AE4137 Sequence (with vector) Restriction Map

Product ID

FHC11714

ORF Sequence

DNA sequence (1356 bp)
Protein sequence (452 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4137

Symbol

TRIM55

Alias : MURF-2, RNF29, muRF2

Description

tripartite motif containing 55, transcript variant 3

Original Clone ID

cp94137

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1356 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 452 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS6185.1 3.1e-104 100.0 TRIM55 CCDS6187.1 2.6e-95 94.4 TRIM55 CCDS6184.1 2.7e-95 94.4 TRIM55 CCDS1746.2 3.7e-50 63.8 TRIM54 CCDS273.1 6.4e-47 60.4 TRIM63 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 26 81 PF00097 Zinc finger IPR000315 120 155 PF00643 Zinc finger HMMSmart IPR001841 26 81 SM00184 Zinc finger IPR000315 119 161 SM00336 Zinc finger ProfileScan IPR001841 26 82 PS50089 Zinc finger IPR000315 119 161 PS50119 Zinc finger IPR017903 269 327 PS51262 COS domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011515918 452 606469 100.0 100.0 NP_908974 452 606469 100.0 100.0 XP_011515917 540 606469 94.4 98.7 NP_149047 540 606469 94.4 98.7 XP_011515916 548 606469 94.4 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4137 Download

>KIEE4137  1356 bp
ATGAGCGCATCTCTGAATTACAAATCTTTTTCCAAAGAGCAGCAGACCATGGATAACTTA
GAGAAGCAACTCATCTGTCCCATCTGCTTAGAGATGTTCACGAAACCTGTGGTGATTCTC
CCTTGTCAGCACAACCTGTGTAGGAAATGTGCCAGTGATATTTTCCAGGCCTCTAACCCG
TATTTGCCCACAAGAGGAGGTACCACCATGGCATCAGGGGGCCGATTCCGCTGCCCATCC
TGTAGACATGAAGTGGTTTTGGATAGACATGGGGTATATGGACTTCAGAGGAACCTGCTG
GTGGAAAATATCATTGACATCTACAAGCAGGAGTCCACCAGGCCAGAAAAGAAATCCGAC
CAGCCCATGTGCGAGGAACATGAAGAGGAGCGCATCAACATCTACTGTCTGAACTGCGAA
GTACCCACCTGCTCTCTGTGCAAGGTGTTTGGTGCACACAAAGACTGCCAGGTGGCTCCC
CTCACTCATGTGTTCCAGAGACAGAAGTCTGAGCTCAGTGATGGCATCGCCATCCTCGTG
GGCAGCAACGATCGAGTCCAGGGAGTGATCAGCCAGCTGGAAGACACCTGCAAAACTATC
GAGGAATGTTGCAGAAAACAGAAACAAGAGCTTTGTGAGAAGTTTGATTACCTGTATGGC
ATTTTGGAGGAGAGGAAGAATGAAATGACCCAAGTCATTACCCGAACCCAAGAGGAGAAA
CTGGAACATGTCCGTGCTCTGATCAAAAAGTATTCTGATCATTTGGAGAACGTCTCAAAG
TTGGTTGAGTCAGGAATTCAGTTTATGGATGAGCCAGAAATGGCAGTGTTTCTGCAGAAT
GCCAAAACCCTGCTAAAAAAAATCTCGGAAGCATCAAAGGCATTTCAGATGGAGAAAATA
GAACATGGCTATGAGAACATGAACCACTTCACAGTCAACCTCAATAGAGAAGAAAAGATA
ATACGTGAAATTGACTTTTACAGAGAAGATGAAGATGAAGAAGAAGAAGAAGGCGGAGAA
GGAGAAAAAGAAGGAGAAGGAGAAGTGGGAGGAGAAGCAGTAGAAGTGGAAGAGGTAGAA
AATGTTCAAACAGAGTTTCCAGGAGAAGATGAAAACCCAGAAAAAGCTTCAGAGCTCTCT
CAGGTGGAGCTGCAGGCTGCCCCTGGGGCACTTCCAGTTTCCTCTCCAGAGCCACCTCCA
GCCCTGCCACCTGCTGCGGATGCCCCTGTGACACAGATTGGATTTGAGGCTCCTCCCCTC
CAGGGACAGGCTGCAGCTCCAGCGAGTGGCAGTGGAGCTGATTCTGAGCCAGCTCGCCAT
ATCTTCTCCTTTTCCTGGTTGAACTCCCTAAATGAA

ORF Protein

Cloned ORF protein sequence for pFN21AE4137 Download

>KIEE4137  452 aa
MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD
QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILV
GSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEK
LEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQMEKI
EHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGEAVEVEEVE
NVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPVTQIGFEAPPL
QGQAAAPASGSGADSEPARHIFSFSWLNSLNE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4137 Download

>pFN21AE4137  6061 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAGCGCATCTCTGAATTACAAATCTTTTTCCAA
AGAGCAGCAGACCATGGATAACTTAGAGAAGCAACTCATCTGTCCCATCTGCTTAGAGAT
GTTCACGAAACCTGTGGTGATTCTCCCTTGTCAGCACAACCTGTGTAGGAAATGTGCCAG
TGATATTTTCCAGGCCTCTAACCCGTATTTGCCCACAAGAGGAGGTACCACCATGGCATC
AGGGGGCCGATTCCGCTGCCCATCCTGTAGACATGAAGTGGTTTTGGATAGACATGGGGT
ATATGGACTTCAGAGGAACCTGCTGGTGGAAAATATCATTGACATCTACAAGCAGGAGTC
CACCAGGCCAGAAAAGAAATCCGACCAGCCCATGTGCGAGGAACATGAAGAGGAGCGCAT
CAACATCTACTGTCTGAACTGCGAAGTACCCACCTGCTCTCTGTGCAAGGTGTTTGGTGC
ACACAAAGACTGCCAGGTGGCTCCCCTCACTCATGTGTTCCAGAGACAGAAGTCTGAGCT
CAGTGATGGCATCGCCATCCTCGTGGGCAGCAACGATCGAGTCCAGGGAGTGATCAGCCA
GCTGGAAGACACCTGCAAAACTATCGAGGAATGTTGCAGAAAACAGAAACAAGAGCTTTG
TGAGAAGTTTGATTACCTGTATGGCATTTTGGAGGAGAGGAAGAATGAAATGACCCAAGT
CATTACCCGAACCCAAGAGGAGAAACTGGAACATGTCCGTGCTCTGATCAAAAAGTATTC
TGATCATTTGGAGAACGTCTCAAAGTTGGTTGAGTCAGGAATTCAGTTTATGGATGAGCC
AGAAATGGCAGTGTTTCTGCAGAATGCCAAAACCCTGCTAAAAAAAATCTCGGAAGCATC
AAAGGCATTTCAGATGGAGAAAATAGAACATGGCTATGAGAACATGAACCACTTCACAGT
CAACCTCAATAGAGAAGAAAAGATAATACGTGAAATTGACTTTTACAGAGAAGATGAAGA
TGAAGAAGAAGAAGAAGGCGGAGAAGGAGAAAAAGAAGGAGAAGGAGAAGTGGGAGGAGA
AGCAGTAGAAGTGGAAGAGGTAGAAAATGTTCAAACAGAGTTTCCAGGAGAAGATGAAAA
CCCAGAAAAAGCTTCAGAGCTCTCTCAGGTGGAGCTGCAGGCTGCCCCTGGGGCACTTCC
AGTTTCCTCTCCAGAGCCACCTCCAGCCCTGCCACCTGCTGCGGATGCCCCTGTGACACA
GATTGGATTTGAGGCTCCTCCCCTCCAGGGACAGGCTGCAGCTCCAGCGAGTGGCAGTGG
AGCTGATTCTGAGCCAGCTCGCCATATCTTCTCCTTTTCCTGGTTGAACTCCCTAAATGA
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T