Characterization of the cloned ORF
N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand
Length: 1824 bp
Restriction map A
Restriction map B
Genomic Structure
Length: 608 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
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Cloned ORF Nucleotide sequence for pFN21AE4164 Download
>KIEE4164 1824 bp ATGGATAATTCATATGCTTTCAATCAACGAAGCACATGTAATGGAATTCCATCTGAGAAG AAAAACAACTTCCTTGTATCAGAAGATCATGGACAAAAAATCTTAAGTGTACTACAGAAT TTTAGAGAACAAAATGTCTTTTATGATTTCAAAATAATTATGAAAGATGAAATAATCCCG TGTCATCGTTGTGTGTTAGCAGCATGCAGTGACTTTTTCAGGGCTATGTTTGAAGTAAAC ATGAAAGAAAGAGATGATGGAAGTGTTACCATTACTAATTTGTCCTCCAAGGCAGTAAAA GCATTTCTCGATTATGCCTATACTGGAAAAACAAAAATAACAGATGATAATGTGGAAATG TTCTTCCAGTTGTCATCATTTCTTCAAGTTTCCTTCCTATCCAAAGCTTGCAGTGACTTT TTAATAAAAAGTATTAATCTTGTCAATTGTTTACAGTTATTATCTATATCAGATAGCTAT GGCTCCACCAGTTTGTTTGATCATGCATTACACTTTGTACAACATCACTTTTCTTTATTA TTTAAATCCAGTGATTTCTTAGAGATGAATTTTGGAGTACTACAGAAATGTCTGGAATCA GATGAATTAAATGTTCCTGAAGAAGAAATGGTACTGAAAGTTGTCCTTAGTTGGACTAAA CATAACTTAGAATCAAGGCAAAAGTATCTGCCTCATTTGATTGAAAAAGTGAGATTACAT CAGTTATCTGAGGAGACACTTCAGGACTGTCTGTTCAATGAAGAGAGTTTACTCAAAAGC ACAAACTGTTTTGACATAATCATGGATGCAATTAAGTGTGTGCAAGGTTCTGGTGGACTC TTCCCTGATGCTCGACCATCCACAACTGAGAAATACATATTCATTCACAAAACTGAGGAA AATGGAGAAAATCAATATACATTTTGCTATAACATTAAATCTGATTCATGGAAAATACTG CCGCAATCACACCTGATTGATTTGCCAGGATCTAGTCTTTCGAGTTACGGAGAGAAAATA TTCTTGACAGGTGGTTGCAAAGGGAAATGTTGTCGAACGGTTCGACTGCATATTGCCGAG TCATATCATGATGCCACTGATCAAACCTGGTGCTACTGTCCAGTGAAAAATGATTTCTTC TTGGTATCAACTATGAAAACACCAAGAACCATGCATACATCAGTTATGGCTCTCGATAGA TTATTTGTCATAGGTGGAAAAACTAGAGGATCCCGGGACATTAAAAGTCTCTTAGATGTT GAATCTTACAATCCTCTTTCCAAAGAATGGATATCTGTTAGCCCATTACCCAGAGGCATA TACTATCCAGAAGCAAGCACATGCCAAAATGTAATTTATGTTCTTGGATCAGAGGTAGAG ATTACAGATGCTTTTAACCCATCACTTGATTGCTTTTTTAAATACAATGCTACAACTGAT CAGTGGTCTGAACTAGTAGCAGAGTTTGGGCAATTTTTTCATGCAACATTAATTAAAGCT GTACCAGTAAACTGTACACTGTATATATGTGACCTTTCCACCTATAAGGTTTATAGTTTT TGTCCAGACACTTGTGTTTGGAAAGGCGAAGGATCTTTTGAGTGTGCAGGCTTTAATGCA GGTGCAATTGGAATTGAAGATAAAATTTATATATTAGGTGGTGATTATGCACCAGATGAA ATCACAGATGAAGTGCAGGTCTACCACAGCAACAGGTCTGAATGGGAAGAAGTTTCACCA ATGCCTAGAGCCTTAACAGAATTTTACTGCCAGGTGATTCAGTTTAATAAATACAGAGAC CCATGGTTTTCTAATCTATGTGCT
Cloned ORF protein sequence for pFN21AE4164 Download
>KIEE4164 608 aa MDNSYAFNQRSTCNGIPSEKKNNFLVSEDHGQKILSVLQNFREQNVFYDFKIIMKDEIIP CHRCVLAACSDFFRAMFEVNMKERDDGSVTITNLSSKAVKAFLDYAYTGKTKITDDNVEM FFQLSSFLQVSFLSKACSDFLIKSINLVNCLQLLSISDSYGSTSLFDHALHFVQHHFSLL FKSSDFLEMNFGVLQKCLESDELNVPEEEMVLKVVLSWTKHNLESRQKYLPHLIEKVRLH QLSEETLQDCLFNEESLLKSTNCFDIIMDAIKCVQGSGGLFPDARPSTTEKYIFIHKTEE NGENQYTFCYNIKSDSWKILPQSHLIDLPGSSLSSYGEKIFLTGGCKGKCCRTVRLHIAE SYHDATDQTWCYCPVKNDFFLVSTMKTPRTMHTSVMALDRLFVIGGKTRGSRDIKSLLDV ESYNPLSKEWISVSPLPRGIYYPEASTCQNVIYVLGSEVEITDAFNPSLDCFFKYNATTD QWSELVAEFGQFFHATLIKAVPVNCTLYICDLSTYKVYSFCPDTCVWKGEGSFECAGFNA GAIGIEDKIYILGGDYAPDEITDEVQVYHSNRSEWEEVSPMPRALTEFYCQVIQFNKYRD PWFSNLCA
Nucleotide Sequence (with vector) for pFN21AE4164 Download
>pFN21AE4164 6529 bp TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA CTTTCAGAGCGATAACGCGATCGCCATGGATAATTCATATGCTTTCAATCAACGAAGCAC ATGTAATGGAATTCCATCTGAGAAGAAAAACAACTTCCTTGTATCAGAAGATCATGGACA AAAAATCTTAAGTGTACTACAGAATTTTAGAGAACAAAATGTCTTTTATGATTTCAAAAT AATTATGAAAGATGAAATAATCCCGTGTCATCGTTGTGTGTTAGCAGCATGCAGTGACTT TTTCAGGGCTATGTTTGAAGTAAACATGAAAGAAAGAGATGATGGAAGTGTTACCATTAC TAATTTGTCCTCCAAGGCAGTAAAAGCATTTCTCGATTATGCCTATACTGGAAAAACAAA AATAACAGATGATAATGTGGAAATGTTCTTCCAGTTGTCATCATTTCTTCAAGTTTCCTT CCTATCCAAAGCTTGCAGTGACTTTTTAATAAAAAGTATTAATCTTGTCAATTGTTTACA GTTATTATCTATATCAGATAGCTATGGCTCCACCAGTTTGTTTGATCATGCATTACACTT TGTACAACATCACTTTTCTTTATTATTTAAATCCAGTGATTTCTTAGAGATGAATTTTGG AGTACTACAGAAATGTCTGGAATCAGATGAATTAAATGTTCCTGAAGAAGAAATGGTACT GAAAGTTGTCCTTAGTTGGACTAAACATAACTTAGAATCAAGGCAAAAGTATCTGCCTCA TTTGATTGAAAAAGTGAGATTACATCAGTTATCTGAGGAGACACTTCAGGACTGTCTGTT CAATGAAGAGAGTTTACTCAAAAGCACAAACTGTTTTGACATAATCATGGATGCAATTAA GTGTGTGCAAGGTTCTGGTGGACTCTTCCCTGATGCTCGACCATCCACAACTGAGAAATA CATATTCATTCACAAAACTGAGGAAAATGGAGAAAATCAATATACATTTTGCTATAACAT TAAATCTGATTCATGGAAAATACTGCCGCAATCACACCTGATTGATTTGCCAGGATCTAG TCTTTCGAGTTACGGAGAGAAAATATTCTTGACAGGTGGTTGCAAAGGGAAATGTTGTCG AACGGTTCGACTGCATATTGCCGAGTCATATCATGATGCCACTGATCAAACCTGGTGCTA CTGTCCAGTGAAAAATGATTTCTTCTTGGTATCAACTATGAAAACACCAAGAACCATGCA TACATCAGTTATGGCTCTCGATAGATTATTTGTCATAGGTGGAAAAACTAGAGGATCCCG GGACATTAAAAGTCTCTTAGATGTTGAATCTTACAATCCTCTTTCCAAAGAATGGATATC TGTTAGCCCATTACCCAGAGGCATATACTATCCAGAAGCAAGCACATGCCAAAATGTAAT TTATGTTCTTGGATCAGAGGTAGAGATTACAGATGCTTTTAACCCATCACTTGATTGCTT TTTTAAATACAATGCTACAACTGATCAGTGGTCTGAACTAGTAGCAGAGTTTGGGCAATT TTTTCATGCAACATTAATTAAAGCTGTACCAGTAAACTGTACACTGTATATATGTGACCT TTCCACCTATAAGGTTTATAGTTTTTGTCCAGACACTTGTGTTTGGAAAGGCGAAGGATC TTTTGAGTGTGCAGGCTTTAATGCAGGTGCAATTGGAATTGAAGATAAAATTTATATATT AGGTGGTGATTATGCACCAGATGAAATCACAGATGAAGTGCAGGTCTACCACAGCAACAG GTCTGAATGGGAAGAAGTTTCACCAATGCCTAGAGCCTTAACAGAATTTTACTGCCAGGT GATTCAGTTTAATAAATACAGAGACCCATGGTTTTCTAATCTATGTGCTGTTTAAACGAA TTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGG CTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAG CATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGA CAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATT GCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCAT TTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTAC AAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAG ATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTAC GTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATT TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAA ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTT ATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAA GTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAAC AGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTC AAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGT CGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCAT CTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC ACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTG CACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCC ATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAA CTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAG GCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCT GATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGAT GGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATG ACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCA CAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGA ACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATC ACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGG CGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGT ATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTC AGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACG ACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCG GTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCG GCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCA GAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGA ACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGA TCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGA AACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTG GTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGT GGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTG CGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATA AACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT |