Characterization of the cloned ORF
N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand
Length: 2625 bp
Restriction map A
Restriction map B
Genomic Structure
Length: 875 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
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Cloned ORF Nucleotide sequence for pFN21AE4240 Download
>KIEE4240 2625 bp ATGTCCCGGCACCATAGCCGCTTCGAAAGAGATTACCGGGTGGGCTGGGACCGCCGCGAA TGGAGCGTCAACGGGACGCATGGGACCACCAGCATCTGCAGTGTCACCTCGGGGGCCGGT GGCGGCACAGCCAGCAGCCTCAGCGTCCGGCCCGGCCTCCTGCCGCTGCCCGTGGTGCCC TCCCGGCTGCCCACCCCGGCTACAGCTCCTGCTCCCTGCACCACCGGCAGCAGCGAGGCC ATCACCAGCCTCGTGGCCAGCTCTGCGTCTGCGGTCACCACCAAGGCTCCCGGCATCTCC AAAGGGGACAGTCAGTCCCAGGGACTGGCGACCAGCATCCGGTGGGGGCAGACGCCTATC AATCAGTCCACACCCTGGGACACTGATGAGCCACCCTCCAAACAGATGAGAGAGAGTGAC AATCCAGGCACAGGGCCATGGGTGACCACGGTGGCCGCCGGGAACCAGCCCACCCTGATC GCACACTCCTATGGAGTGGCCCAGCCTCCCACCTTCAGCCCGGCTGTGAACGTCCAGGCC CCGGTCATTGGGGTGACCCCCTCACTGCCTCCCCACGTGGGGCCCCAGCTCCCGCTGATG CCAGGCCACTACTCGCTCCCTCAGCCGCCCTCTCAGCCACTGAGCAGCGTGGTGGTCAAC ATGCCTGCCCAGGCCCTGTATGCCAGCCCTCAGCCCCTGGCCGTGTCCACACTGCCCGGT GTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGTGGGCAACGGCCACATGGCAGGGCCC CTGCTGCCTCCACCGCCGCCAGCCCAGCCGTCCGCCACTCTCCCCAGTGGTGCCCCTGCC ACCAATGGGCCCCCCACAACCGACTCGGCCCACGGGCTGCAGATGCTGCGGACCATTGGC GTGGGGAAGTATGAGTTCACCGACCCGGGGCACCCCAGAGAAATGTTGAAGGAATTGAAC CAGCAACGCAGAGCGAAAGCGTTTACAGACCTGAAAATTGTTGTTGAAGGCAGAGAGTTT GAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAAGGACCTGATTCAAAGG TCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAAGCTGGAGCTCGTCCTGTCGAACCTG CAGGCAGACGTCCTGGAGTTGCTGCTGGAGTTTGTCTACACGGGCTCCCTGGTCATCGAC TCGGCCAACGCCAAGACACTGCTGGAGGCGGCCAGCAAGTTCCAGTTCCACACCTTCTGC AAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGACGGCCAGCAACTGCCTGGGCGTGCTG GCCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTACCACATGGCCAAGGCCTTCGCGCTG CAGATCTTCCCCGAGGTGGCCGCCCAGGAGGAGATCCTCAGCATCTCCAAGGACGACTTC ATCGCCTACGTCTCCAACGACAGCCTCAACACCAAGGCTGAGGAGCTGGTGTACGAGACA GTCATCAAGTGGATCAAGAAGGACCCCGCGACACGCACACAGTACGCGGCTGAGCTCCTG GCCGTGGTCCGCCTCCCCTTCATCCACCCCAGCTACCTGCTCAATGTGGTTGACAATGAA GAGCTGATCAAGTCATCAGAAGCCTGCCGGGACCTGGTGAACGAGGCCAAACGCTACCAT ATGCTGCCCCACGCCCGCCAGGAGATGCAGACGCCCCGAACCCGGCCGCGCCTCTCTGCA GGTGTGGCTGAGGTCATCGTCTTGGTTGGGGGCCGTCAGATGGTGGGGATGACCCAGCGC TCGCTGGTGGCCGTCACCTGCTGGAACCCGCAGAACAACAAGTGGTACCCCTTGGCCTCG CTGCCCTTCTATGACCGCGAGTTCTTCAGTGTAGTGAGTGCAGGGGACAACATCTACCTC TCAGGTGGGATGGAATCAGGGGTGACGCTGGCTGATGTCTGGTGCTACATGTCCCTGCTT GATAACTGGAACCTCGTCTCCAGAATGACAGTCCCCCGCTGTCGGCACAATAGCCTCGTC TACGATGGGAAGATTTACACCCTCGGGGGACTTGGCGTGGCAGGCAACGTGGACCACGTG GAGAGGTACGACACCATCACCAACCAATGGGAGGCGGTGGCCCCTCTGCCCAAGGCAGTA CACTCTGCTGCAGCCACAGTGTGTGGCGGCAAGATCTACGTGTTTGGTGGGGTGAACGAG GCAGGCCGAGCTGCCGGCGTCCTCCAGTCTTACGTTCCTCAGACCAACACGTGGAGCTTC ATCGAGTCCCCAATGATTGACAACAAGTATGCCCCCGCTGTCACGCTCAATGGCTTCGTT TTCATCCTGGGCGGGGCTTATGCCAGAGCTACCACCATCTACGACCCTGAGAAAGGAAAC ATTAAGGCGGGCCCAAACATGAACCACTCTCGCCAGTTCTGCAGTGCTGTGGTGCTTGAT GGCAAGATTTATGCAACTGGAGGTATTGTCAGCAGTGAAGGGCCCGCGCTGGGCAACATG GAGGCCTACGAGCCCACAACCAACACATGGACCCTCCTCCCCCACATGCCCTGCCCTGTG TTCAGACACGGCTGCGTCGTGATAAAGAAATATATTCAAAGCGGC
Cloned ORF protein sequence for pFN21AE4240 Download
>KIEE4240 875 aa MSRHHSRFERDYRVGWDRREWSVNGTHGTTSICSVTSGAGGGTASSLSVRPGLLPLPVVP SRLPTPATAPAPCTTGSSEAITSLVASSASAVTTKAPGISKGDSQSQGLATSIRWGQTPI NQSTPWDTDEPPSKQMRESDNPGTGPWVTTVAAGNQPTLIAHSYGVAQPPTFSPAVNVQA PVIGVTPSLPPHVGPQLPLMPGHYSLPQPPSQPLSSVVVNMPAQALYASPQPLAVSTLPG VGQVARPGPTAVGNGHMAGPLLPPPPPAQPSATLPSGAPATNGPPTTDSAHGLQMLRTIG VGKYEFTDPGHPREMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQR SVQDSGQGGREKLELVLSNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFC KVCVSFLEKQLTASNCLGVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDF IAYVSNDSLNTKAEELVYETVIKWIKKDPATRTQYAAELLAVVRLPFIHPSYLLNVVDNE ELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQR SLVAVTCWNPQNNKWYPLASLPFYDREFFSVVSAGDNIYLSGGMESGVTLADVWCYMSLL DNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGNVDHVERYDTITNQWEAVAPLPKAV HSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTWSFIESPMIDNKYAPAVTLNGFV FILGGAYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLDGKIYATGGIVSSEGPALGNM EAYEPTTNTWTLLPHMPCPVFRHGCVVIKKYIQSG
Nucleotide Sequence (with vector) for pFN21AE4240 Download
>pFN21AE4240 7330 bp TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA CTTTCAGAGCGATAACGCGATCGCCATGTCCCGGCACCATAGCCGCTTCGAAAGAGATTA CCGGGTGGGCTGGGACCGCCGCGAATGGAGCGTCAACGGGACGCATGGGACCACCAGCAT CTGCAGTGTCACCTCGGGGGCCGGTGGCGGCACAGCCAGCAGCCTCAGCGTCCGGCCCGG CCTCCTGCCGCTGCCCGTGGTGCCCTCCCGGCTGCCCACCCCGGCTACAGCTCCTGCTCC CTGCACCACCGGCAGCAGCGAGGCCATCACCAGCCTCGTGGCCAGCTCTGCGTCTGCGGT CACCACCAAGGCTCCCGGCATCTCCAAAGGGGACAGTCAGTCCCAGGGACTGGCGACCAG CATCCGGTGGGGGCAGACGCCTATCAATCAGTCCACACCCTGGGACACTGATGAGCCACC CTCCAAACAGATGAGAGAGAGTGACAATCCAGGCACAGGGCCATGGGTGACCACGGTGGC CGCCGGGAACCAGCCCACCCTGATCGCACACTCCTATGGAGTGGCCCAGCCTCCCACCTT CAGCCCGGCTGTGAACGTCCAGGCCCCGGTCATTGGGGTGACCCCCTCACTGCCTCCCCA CGTGGGGCCCCAGCTCCCGCTGATGCCAGGCCACTACTCGCTCCCTCAGCCGCCCTCTCA GCCACTGAGCAGCGTGGTGGTCAACATGCCTGCCCAGGCCCTGTATGCCAGCCCTCAGCC CCTGGCCGTGTCCACACTGCCCGGTGTGGGGCAGGTGGCCCGCCCAGGACCCACCGCTGT GGGCAACGGCCACATGGCAGGGCCCCTGCTGCCTCCACCGCCGCCAGCCCAGCCGTCCGC CACTCTCCCCAGTGGTGCCCCTGCCACCAATGGGCCCCCCACAACCGACTCGGCCCACGG GCTGCAGATGCTGCGGACCATTGGCGTGGGGAAGTATGAGTTCACCGACCCGGGGCACCC CAGAGAAATGTTGAAGGAATTGAACCAGCAACGCAGAGCGAAAGCGTTTACAGACCTGAA AATTGTTGTTGAAGGCAGAGAGTTTGAAGTCCACCAAAATGTTCTAGCTTCCTGCAGCTT GTATTTCAAGGACCTGATTCAAAGGTCCGTGCAAGACAGCGGCCAGGGCGGCCGGGAGAA GCTGGAGCTCGTCCTGTCGAACCTGCAGGCAGACGTCCTGGAGTTGCTGCTGGAGTTTGT CTACACGGGCTCCCTGGTCATCGACTCGGCCAACGCCAAGACACTGCTGGAGGCGGCCAG CAAGTTCCAGTTCCACACCTTCTGCAAAGTCTGCGTGTCCTTTCTCGAGAAGCAGCTGAC GGCCAGCAACTGCCTGGGCGTGCTGGCCATGGCCGAGGCCATGCAGTGCAGCGAGCTCTA CCACATGGCCAAGGCCTTCGCGCTGCAGATCTTCCCCGAGGTGGCCGCCCAGGAGGAGAT CCTCAGCATCTCCAAGGACGACTTCATCGCCTACGTCTCCAACGACAGCCTCAACACCAA GGCTGAGGAGCTGGTGTACGAGACAGTCATCAAGTGGATCAAGAAGGACCCCGCGACACG CACACAGTACGCGGCTGAGCTCCTGGCCGTGGTCCGCCTCCCCTTCATCCACCCCAGCTA CCTGCTCAATGTGGTTGACAATGAAGAGCTGATCAAGTCATCAGAAGCCTGCCGGGACCT GGTGAACGAGGCCAAACGCTACCATATGCTGCCCCACGCCCGCCAGGAGATGCAGACGCC CCGAACCCGGCCGCGCCTCTCTGCAGGTGTGGCTGAGGTCATCGTCTTGGTTGGGGGCCG TCAGATGGTGGGGATGACCCAGCGCTCGCTGGTGGCCGTCACCTGCTGGAACCCGCAGAA CAACAAGTGGTACCCCTTGGCCTCGCTGCCCTTCTATGACCGCGAGTTCTTCAGTGTAGT GAGTGCAGGGGACAACATCTACCTCTCAGGTGGGATGGAATCAGGGGTGACGCTGGCTGA TGTCTGGTGCTACATGTCCCTGCTTGATAACTGGAACCTCGTCTCCAGAATGACAGTCCC CCGCTGTCGGCACAATAGCCTCGTCTACGATGGGAAGATTTACACCCTCGGGGGACTTGG CGTGGCAGGCAACGTGGACCACGTGGAGAGGTACGACACCATCACCAACCAATGGGAGGC GGTGGCCCCTCTGCCCAAGGCAGTACACTCTGCTGCAGCCACAGTGTGTGGCGGCAAGAT CTACGTGTTTGGTGGGGTGAACGAGGCAGGCCGAGCTGCCGGCGTCCTCCAGTCTTACGT TCCTCAGACCAACACGTGGAGCTTCATCGAGTCCCCAATGATTGACAACAAGTATGCCCC CGCTGTCACGCTCAATGGCTTCGTTTTCATCCTGGGCGGGGCTTATGCCAGAGCTACCAC CATCTACGACCCTGAGAAAGGAAACATTAAGGCGGGCCCAAACATGAACCACTCTCGCCA GTTCTGCAGTGCTGTGGTGCTTGATGGCAAGATTTATGCAACTGGAGGTATTGTCAGCAG TGAAGGGCCCGCGCTGGGCAACATGGAGGCCTACGAGCCCACAACCAACACATGGACCCT CCTCCCCCACATGCCCTGCCCTGTGTTCAGACACGGCTGCGTCGTGATAAAGAAATATAT TCAAAGCGGCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTG CAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTG CCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATA AGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATT TGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTT AACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTT TTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCG CTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGT TTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGA AATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC ATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATT CAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGT TACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGT TTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGAC GCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTAC TCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCG AAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGG GAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCA ATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAA CAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATC ATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGG AGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATT AAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAA AGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAA AAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGC TCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGA CAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTT CTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCT GTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAA GAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTT GCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTA CGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTAT CAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGAT GGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGG TAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGC GATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGC GCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCT GCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGG ATCGAGATCT |