CSTF1 ORF clone pFN21AE4418

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE4418

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Clone info.

Species

human

Clone Name

pFN21AE4418 Sequence (with vector) Restriction Map

Product ID

FHC07941

ORF Sequence

DNA sequence (1293 bp)
Protein sequence (431 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE4418

Symbol

CSTF1

Alias : CstF-50, CstFp50

Description

cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa, transcript variant 2

Original Clone ID

oc94418

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1293 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 431 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13452.1 4e-139 100.0 CSTF1 CCDS3012.1 2.7e-12 26.0 WDR5B CCDS6981.1 6.8e-11 26.2 WDR5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 188 202 PR00320 G-protein beta WD-40 repeat IPR020472 277 291 PR00320 G-protein beta WD-40 repeat IPR020472 321 335 PR00320 G-protein beta WD-40 repeat HMMPfam IPR019781 105 134 PF00400 WD40 repeat IPR019781 166 201 PF00400 WD40 repeat IPR019781 221 245 PF00400 WD40 repeat IPR019781 261 290 PF00400 WD40 repeat IPR019781 308 334 PF00400 WD40 repeat IPR019781 395 424 PF00400 WD40 repeat HMMSmart IPR001680 97 136 SM00320 WD40 repeat IPR001680 162 201 SM00320 WD40 repeat IPR001680 206 245 SM00320 WD40 repeat IPR001680 248 290 SM00320 WD40 repeat IPR001680 293 334 SM00320 WD40 repeat IPR001680 385 425 SM00320 WD40 repeat ProfileScan IPR019782 104 138 PS50082 WD40 repeat 2 IPR017986 104 431 PS50294 WD40-repeat-containing domain IPR019782 169 210 PS50082 WD40 repeat 2 IPR019782 258 299 PS50082 WD40 repeat 2 IPR019782 309 343 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011526902 431 600369 100.0 100.0 NP_001028694 431 600369 100.0 100.0 NP_001315 431 600369 100.0 100.0 NP_001028693 431 600369 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE4418 Download

>KIEE4418  1293 bp
ATGTACAGAACCAAAGTGGGCTTGAAGGACCGCCAGCAGCTCTACAAGCTGATCATTAGC
CAGCTGCTATATGACGGCTACATCAGCATCGCCAATGGCCTCATCAATGAAATCAAGCCT
CAGTCTGTGTGTGCACCCTCGGAGCAGCTCCTGCATCTCATCAAACTCGGAATGGAAAAC
GATGACACCGCAGTTCAGTATGCAATTGGTCGTTCAGATACTGTTGCCCCTGGCACAGGG
ATTGACCTGGAATTTGATGCAGATGTTCAGACTATGTCCCCAGAGGCTTCTGAGTACGAA
ACATGCTATGTCACATCACATAAAGGACCATGCCGTGTAGCTACCTATAGTAGAGATGGA
CAGTTAATAGCTACTGGGTCTGCTGATGCTTCGATAAAGATACTTGACACAGAGAGGATG
TTGGCCAAAAGTGCCATGCCAATAGAGGTCATGATGAATGAGACCGCACAACAAAATATG
GAAAACCACCCAGTGATTCGAACTCTTTATGACCATGTGGATGAAGTCACGTGCCTTGCT
TTCCACCCAACAGAACAGATCCTGGCTTCTGGTTCAAGGGATTATACTCTTAAATTATTT
GATTATTCCAAACCATCAGCAAAAAGAGCCTTCAAATACATTCAGGAAGCTGAAATGTTA
CGTTCCATCTCTTTTCATCCTTCTGGAGACTTTATACTTGTCGGAACTCAGCATCCTACT
CTTCGCCTTTATGATATCAACACCTTTCAATGTTTTGTCTCTTGCAATCCTCAAGATCAA
CACACCGATGCTATATGTTCCGTTAATTACAATTCTAGTGCCAATATGTACGTAACTGGA
AGCAAGGACGGCTGCATCAAATTATGGGATGGTGTTTCAAATCGATGCATCACAACTTTT
GAGAAAGCACATGACGGTGCTGAAGTTTGTTCTGCCATTTTTTCCAAAAATTCTAAATAC
ATTCTCTCAAGTGGAAAAGACTCTGTAGCTAAACTTTGGGAAATATCAACGGGACGAACA
CTGGTCAGATACACGGGCGCGGGTTTAAGTGGACGCCAGGTGCACCGGACACAGGCTGTG
TTTAACCACACCGAGGACTATGTGTTGCTGCCCGACGAGAGGACGATCAGTCTTTGCTGC
TGGGACTCGAGGACAGCCGAGCGGAGAAACCTGCTGTCGTTGGGGCACAACAATATTGTA
CGCTGCATAGTGCACTCCCCCACCAACCCCGGGTTCATGACGTGCAGCGATGACTTCAGA
GCGCGGTTTTGGTACCGGAGATCGACCACTGAC

ORF Protein

Cloned ORF protein sequence for pFN21AE4418 Download

>KIEE4418  431 aa
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE4418 Download

>pFN21AE4418  5998 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTACAGAACCAAAGTGGGCTTGAAGGACCGCCA
GCAGCTCTACAAGCTGATCATTAGCCAGCTGCTATATGACGGCTACATCAGCATCGCCAA
TGGCCTCATCAATGAAATCAAGCCTCAGTCTGTGTGTGCACCCTCGGAGCAGCTCCTGCA
TCTCATCAAACTCGGAATGGAAAACGATGACACCGCAGTTCAGTATGCAATTGGTCGTTC
AGATACTGTTGCCCCTGGCACAGGGATTGACCTGGAATTTGATGCAGATGTTCAGACTAT
GTCCCCAGAGGCTTCTGAGTACGAAACATGCTATGTCACATCACATAAAGGACCATGCCG
TGTAGCTACCTATAGTAGAGATGGACAGTTAATAGCTACTGGGTCTGCTGATGCTTCGAT
AAAGATACTTGACACAGAGAGGATGTTGGCCAAAAGTGCCATGCCAATAGAGGTCATGAT
GAATGAGACCGCACAACAAAATATGGAAAACCACCCAGTGATTCGAACTCTTTATGACCA
TGTGGATGAAGTCACGTGCCTTGCTTTCCACCCAACAGAACAGATCCTGGCTTCTGGTTC
AAGGGATTATACTCTTAAATTATTTGATTATTCCAAACCATCAGCAAAAAGAGCCTTCAA
ATACATTCAGGAAGCTGAAATGTTACGTTCCATCTCTTTTCATCCTTCTGGAGACTTTAT
ACTTGTCGGAACTCAGCATCCTACTCTTCGCCTTTATGATATCAACACCTTTCAATGTTT
TGTCTCTTGCAATCCTCAAGATCAACACACCGATGCTATATGTTCCGTTAATTACAATTC
TAGTGCCAATATGTACGTAACTGGAAGCAAGGACGGCTGCATCAAATTATGGGATGGTGT
TTCAAATCGATGCATCACAACTTTTGAGAAAGCACATGACGGTGCTGAAGTTTGTTCTGC
CATTTTTTCCAAAAATTCTAAATACATTCTCTCAAGTGGAAAAGACTCTGTAGCTAAACT
TTGGGAAATATCAACGGGACGAACACTGGTCAGATACACGGGCGCGGGTTTAAGTGGACG
CCAGGTGCACCGGACACAGGCTGTGTTTAACCACACCGAGGACTATGTGTTGCTGCCCGA
CGAGAGGACGATCAGTCTTTGCTGCTGGGACTCGAGGACAGCCGAGCGGAGAAACCTGCT
GTCGTTGGGGCACAACAATATTGTACGCTGCATAGTGCACTCCCCCACCAACCCCGGGTT
CATGACGTGCAGCGATGACTTCAGAGCGCGGTTTTGGTACCGGAGATCGACCACTGACGT
TTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAG
CTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGC
AATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGAT
GAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGT
GATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAAT
TGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAA
AACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCC
CTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTG
GCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGA
ACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAA
CCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGT
GTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACG
CTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTG
GATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATG
AGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAG
CAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACA
GAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATG
AGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTG
AATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACG
TTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGAC
TGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGG
TTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTG
GGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACT
ATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
TTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATAC
GGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAA
AGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTG
ACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAA
GATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGC
TTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCAC
GCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAAC
CCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGG
TAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGT
ATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGA
CAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCT
CTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGA
TTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACG
CTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCT
TCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTG
GGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTG
TACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGT
TTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTT
TTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCC
ATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT