CSTF2T ORF clone pFN21AE5789

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21AE5789

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Clone info.

Species

human

Clone Name

pFN21AE5789 Sequence (with vector) Restriction Map

Product ID

FHC16550

ORF Sequence

DNA sequence (1848 bp)
Protein sequence (616 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5789

Symbol

CSTF2T

Alias : CstF-64T

Description

cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant

Original Clone ID

cp95789

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1848 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 616 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7245.1 2.6e-97 100.0 CSTF2T CCDS14473.1 2.8e-56 69.7 CSTF2 CCDS78498.1 1.1e-40 67.6 CSTF2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 18 88 PF00076 RNA recognition motif domain HMMSmart IPR000504 17 90 SM00360 RNA recognition motif domain ProfileScan IPR000504 16 94 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056050 616 611968 100.0 100.0 NP_001316 577 300907 69.7 99.8 NP_001293135 597 300907 67.6 99.8 NP_001293138 560 300907 68.6 99.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5789 Download

>KIEE5789  1848 bp
ATGTCGAGTTTGGCGGTGAGAGACCCGGCAATGGATCGATCACTGCGTTCCGTGTTCGTG
GGGAACATTCCATATGAGGCAACTGAGGAGCAGTTAAAGGACATTTTCTCGGAGGTTGGT
TCTGTTGTCAGTTTCCGGCTGGTATACGATAGAGAGACGGGAAAACCCAAGGGCTATGGC
TTCTGCGAATACCAAGACCAGGAGACCGCGCTTAGTGCCATGCGGAACCTCAATGGGCGG
GAGTTCAGTGGGAGAGCGCTTCGGGTGGACAATGCTGCCAGTGAAAAGAATAAGGAGGAG
TTAAAGAGCCTTGGGCCTGCAGCGCCCATTATTGACTCACCCTATGGGGATCCCATCGAT
CCAGAAGATGCCCCTGAATCGATTACCAGAGCAGTAGCCAGTCTCCCCCCGGAGCAGATG
TTTGAGCTGATGAAGCAGATGAAGCTCTGTGTCCAAAACAGCCACCAGGAAGCTCGAAAC
ATGTTACTTCAAAATCCACAACTGGCTTATGCACTGTTGCAGGCACAAGTAGTGATGAGA
ATCATGGATCCAGAGATTGCTCTGAAAATTCTGCATCGGAAGATACATGTCACACCACTG
ATCCCAGGCAAATCTCAGTCTGTGTCTGTCTCTGGCCCTGGCCCTGGCCCTGGCCCTGGG
CTCTGCCCAGGACCTAATGTTCTGCTGAACCAGCAGAATCCTCCAGCTCCTCAGCCTCAG
CATTTGGCTAGAAGACCTGTGAAGGACATTCCTCCTCTGATGCAGACTCCTATCCAGGGT
GGAATTCCAGCTCCAGGGCCAATACCAGCTGCAGTTCCCGGAGCTGGTCCTGGTTCCTTA
ACTCCTGGAGGAGCAATGCAGCCCCAACTTGGAATGCCAGGGGTTGGCCCAGTGCCTTTA
GAGCGGGGACAAGTGCAGATGTCAGATCCTAGAGCTCCTATACCTCGCGGACCCGTGACT
CCTGGTGGTCTGCCTCCTCGAGGACTGTTAGGAGATGCTCCAAATGACCCACGTGGAGGG
ACTTTGCTTTCAGTCACTGGAGAAGTGGAGCCCAGAGGTTATCTGGGTCCACCCCATCAG
GGTCCCCCCATGCATCATGCCTCTGGTCATGACACTCGTGGCCCTTCCTCACATGAGATG
AGGGGAGGGCCATTAGGAGATCCCAGACTGCTAATTGGAGAGCCCAGAGGCCCCATGATA
GATCAAAGGGGTCTACCTATGGATGGTAGAGGTGGTAGAGATTCTCGAGCGATGGAGACT
CGTGCCATGGAAACTGAGGTCTTAGAGACACGTGTAATGGAGAGGAGAGGAATGGAGACC
TGTGCGATGGAAACCAGAGGGATGGAAGCAAGGGGCATGGATGCAAGAGGATTGGAGATG
AGGGGCCCTGTCCCCAGTTCAAGAGGCCCTATGACTGGTGGAATTCAGGGTCCTGGTCCC
ATTAATATAGGGGCAGGTGGCCCTCCTCAGGGACCCAGACAGGTCCCAGGCATTTCAGGG
GTGGGGAATCCTGGAGCTGGTATGCAGGGTACAGGCATACAAGGAACAGGCATGCAGGGA
GCAGGCATACAAGGAGGAGGGATGCAGGGGGCAGGCATACAAGGAGTCAGTATACAAGGA
GGAGGTATACAAGGAGGAGGTATACAGGGGGCAAGCAAGCAAGGTGGAAGCCAGCCTAGC
AGTTTTAGTCCTGGGCAGAGCCAGGTCACTCCACAGGATCAGGAGAAGGCAGCTTTGATC
ATGCAGGTTCTTCAACTGACTGCAGATCAGATTGCCATGCTGCCCCCTGAGCAAAGGCAG
AGTATCCTGATTTTAAAGGAACAAATCCAGAAATCCACTGGAGCGTCT

ORF Protein

Cloned ORF protein sequence for pFN21AE5789 Download

>KIEE5789  616 aa
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQ
HLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGAGPGSLTPGGAMQPQLGMPGVGPVPL
ERGQVQMSDPRAPIPRGPVTPGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQ
GPPMHHASGHDTRGPSSHEMRGGPLGDPRLLIGEPRGPMIDQRGLPMDGRGGRDSRAMET
RAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMTGGIQGPGP
INIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGTGMQGAGIQGGGMQGAGIQGVSIQG
GGIQGGGIQGASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQ
SILILKEQIQKSTGAS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5789 Download

>pFN21AE5789  6553 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCGAGTTTGGCGGTGAGAGACCCGGCAATGGA
TCGATCACTGCGTTCCGTGTTCGTGGGGAACATTCCATATGAGGCAACTGAGGAGCAGTT
AAAGGACATTTTCTCGGAGGTTGGTTCTGTTGTCAGTTTCCGGCTGGTATACGATAGAGA
GACGGGAAAACCCAAGGGCTATGGCTTCTGCGAATACCAAGACCAGGAGACCGCGCTTAG
TGCCATGCGGAACCTCAATGGGCGGGAGTTCAGTGGGAGAGCGCTTCGGGTGGACAATGC
TGCCAGTGAAAAGAATAAGGAGGAGTTAAAGAGCCTTGGGCCTGCAGCGCCCATTATTGA
CTCACCCTATGGGGATCCCATCGATCCAGAAGATGCCCCTGAATCGATTACCAGAGCAGT
AGCCAGTCTCCCCCCGGAGCAGATGTTTGAGCTGATGAAGCAGATGAAGCTCTGTGTCCA
AAACAGCCACCAGGAAGCTCGAAACATGTTACTTCAAAATCCACAACTGGCTTATGCACT
GTTGCAGGCACAAGTAGTGATGAGAATCATGGATCCAGAGATTGCTCTGAAAATTCTGCA
TCGGAAGATACATGTCACACCACTGATCCCAGGCAAATCTCAGTCTGTGTCTGTCTCTGG
CCCTGGCCCTGGCCCTGGCCCTGGGCTCTGCCCAGGACCTAATGTTCTGCTGAACCAGCA
GAATCCTCCAGCTCCTCAGCCTCAGCATTTGGCTAGAAGACCTGTGAAGGACATTCCTCC
TCTGATGCAGACTCCTATCCAGGGTGGAATTCCAGCTCCAGGGCCAATACCAGCTGCAGT
TCCCGGAGCTGGTCCTGGTTCCTTAACTCCTGGAGGAGCAATGCAGCCCCAACTTGGAAT
GCCAGGGGTTGGCCCAGTGCCTTTAGAGCGGGGACAAGTGCAGATGTCAGATCCTAGAGC
TCCTATACCTCGCGGACCCGTGACTCCTGGTGGTCTGCCTCCTCGAGGACTGTTAGGAGA
TGCTCCAAATGACCCACGTGGAGGGACTTTGCTTTCAGTCACTGGAGAAGTGGAGCCCAG
AGGTTATCTGGGTCCACCCCATCAGGGTCCCCCCATGCATCATGCCTCTGGTCATGACAC
TCGTGGCCCTTCCTCACATGAGATGAGGGGAGGGCCATTAGGAGATCCCAGACTGCTAAT
TGGAGAGCCCAGAGGCCCCATGATAGATCAAAGGGGTCTACCTATGGATGGTAGAGGTGG
TAGAGATTCTCGAGCGATGGAGACTCGTGCCATGGAAACTGAGGTCTTAGAGACACGTGT
AATGGAGAGGAGAGGAATGGAGACCTGTGCGATGGAAACCAGAGGGATGGAAGCAAGGGG
CATGGATGCAAGAGGATTGGAGATGAGGGGCCCTGTCCCCAGTTCAAGAGGCCCTATGAC
TGGTGGAATTCAGGGTCCTGGTCCCATTAATATAGGGGCAGGTGGCCCTCCTCAGGGACC
CAGACAGGTCCCAGGCATTTCAGGGGTGGGGAATCCTGGAGCTGGTATGCAGGGTACAGG
CATACAAGGAACAGGCATGCAGGGAGCAGGCATACAAGGAGGAGGGATGCAGGGGGCAGG
CATACAAGGAGTCAGTATACAAGGAGGAGGTATACAAGGAGGAGGTATACAGGGGGCAAG
CAAGCAAGGTGGAAGCCAGCCTAGCAGTTTTAGTCCTGGGCAGAGCCAGGTCACTCCACA
GGATCAGGAGAAGGCAGCTTTGATCATGCAGGTTCTTCAACTGACTGCAGATCAGATTGC
CATGCTGCCCCCTGAGCAAAGGCAGAGTATCCTGATTTTAAAGGAACAAATCCAGAAATC
CACTGGAGCGTCTGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT