RPAP2 ORF clone pFN21AE9395

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Halotag ORF Clone pFN21AE9395

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Clone info.

Species

human

Clone Name

pFN21AE9395 Sequence (with vector) Restriction Map

Product ID

FHC20408

ORF Sequence

DNA sequence (1836 bp)
Protein sequence (612 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE9395

Symbol

RPAP2

Alias : C1orf82, Rtr1

Description

RNA polymerase II associated protein 2

Original Clone ID

cp99395

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1836 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 612 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS740.1 2.7e-216 100.0 RPAP2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007308 80 152 PF04181 Protein of unknown function DUF408 ProfileScan IPR007308 77 160 PS51479 Protein of unknown function DUF408
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 505 IVLEKLSKVLPGLLVPLQITLGD 527 SECONDARY 23 2 550 PAEWTLIAMVLLSLLTPILGIQ 571 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_079089 612 611476 100.0 100.0 XP_005271280 566 611476 99.6 92.5 XP_016857853 569 611476 100.0 92.0 XP_011540469 569 611476 100.0 92.0 XP_016857852 575 611476 100.0 92.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE9395 Download

>KIEE9395  1836 bp
ATGGCGGACTTCGCTGGGCCGTCTTCTGCCGGCCGCAAGGCCGGGGCTCCCCGCTGCTCT
CGAAAAGCCGCAGGTACTAAACAGACAAGTACTTTGAAACAAGAAGATGCTTCTAAAAGG
AAAGCTGAACTAGAAGCAGCTGTGAGAAAGAAGATTGAATTTGAGAGAAAAGCTCTACAT
ATTGTTGAACAGCTTTTAGAGGAGAATATTACAGAAGAGTTCCTAATGGAGTGTGGGAGG
TTCATTACACCTGCTCACTACAGTGATGTCGTGGATGAACGTTCTATTGTCAAACTCTGT
GGTTATCCTTTATGTCAGAAGAAGCTGGGAATTGTACCAAAACAGAAATATAAAATTTCT
ACCAAAACCAATAAAGTCTATGATATTACTGAAAGAAAGTCTTTTTGCAGCAATTTTTGT
TATCAAGCATCTAAGTTTTTTGAAGCACAAATTCCCAAAACTCCAGTATGGGTTCGAGAA
GAAGAGAGGCATCCTGATTTTCAACTGCTAAAGGAAGAACAAAGTGGCCATTCTGGAGAA
GAAGTACAGTTATGCAGTAAAGCCATTAAAACATCAGATATCGACAATCCTAGCCACTTT
GAAAAGCAATATGAATCTAGTTCTTCTAGCACTCACAGTGATAGTAGCAGTGACAATGAG
CAAGACTTTGTTTCCTCCATTCTACCAGGAAACAGACCAAATTCAACAAATATTAGACCA
CAGCTGCACCAAAAAAGCATAATGAAAAAGAAAGCTGGTCACAAAGCTAACTCCAAACAC
AAAGACAAAGAACAGACAGTAGTAGATGTCACTGAGCAGTTAGGCGATTGCAAATTAGAT
AGTCAGGAGAAAGATGCTACATGTGAACTTCCTTTACAGAAAGTAAATACTCAGAGTTCT
TCAAATAGCACTTTGCCTGAAAGATTAAAAGCGTCAGAAAATTCTGAAAGTGAATACAGT
AGGTCAGAAATAACTCTAGTAGGCATAAGTAAGAAAAGTGCAGAGCATTTTAAGAGAAAA
TTTGCCAAATCAAACCAAGTGTCTAGGTCAGTGTCTAGTTCAGTGCAGGTGTGTCCTGAA
GTTGGAAAGAGAAACTTACTTAAAGTTTTGAAGGAGACTTTGATTGAGTGGAAGACAGAA
GAAACATTGAGGTTTTTGTATGGCCAGAATTATGCTTCTGTGTGTCTGAAACCCGAAGCC
TCTCTGGTTAAAGAAGAACTTGATGAAGATGACATAATCTCAGATCCAGATAGTCATTTC
CCTGCCTGGAGGGAATCTCAGAACAGCTTGGATGAGTCTTTACCTTTTAGGGGCTCAGGT
ACAGCCATTAAACCACTGCCAAGTTACGAGAATTTGAAAAAAGAAACTGAAAAGTTAAAT
CTGAGGATCAGGGAGTTTTACAGAGGACGGTATGTTTTGGGTGAAGAAACCACCAAATCA
CAAGACTCAGAAGAGCATGATTCCACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAG
ATTAGAAAACGCATCGTACTTGAAAAGTTGAGTAAAGTGTTGCCTGGGCTTCTGGTTCCT
CTTCAGATTACATTGGGAGATATTTACACACAACTTAAAAATCTTGTTCGAACTTTCAGG
TTAACAAATAGAAATATTATACACAAACCTGCGGAATGGACTTTAATTGCTATGGTGTTG
CTGTCATTACTGACCCCAATTCTTGGCATTCAGAAACATTCTCAGGAAGGTATGGTGTTT
ACACGGTTTCTAGACACCCTCCTTGAAGAATTACATCTAAAAAATGAAGACCTTGAAAGT
CTAACCATCATATTTAGAACCAGCTGTTTACCAGAG

ORF Protein

Cloned ORF protein sequence for pFN21AE9395 Download

>KIEE9395  612 aa
MADFAGPSSAGRKAGAPRCSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALH
IVEQLLEENITEEFLMECGRFITPAHYSDVVDERSIVKLCGYPLCQKKLGIVPKQKYKIS
TKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEERHPDFQLLKEEQSGHSGE
EVQLCSKAIKTSDIDNPSHFEKQYESSSSSTHSDSSSDNEQDFVSSILPGNRPNSTNIRP
QLHQKSIMKKKAGHKANSKHKDKEQTVVDVTEQLGDCKLDSQEKDATCELPLQKVNTQSS
SNSTLPERLKASENSESEYSRSEITLVGISKKSAEHFKRKFAKSNQVSRSVSSSVQVCPE
VGKRNLLKVLKETLIEWKTEETLRFLYGQNYASVCLKPEASLVKEELDEDDIISDPDSHF
PAWRESQNSLDESLPFRGSGTAIKPLPSYENLKKETEKLNLRIREFYRGRYVLGEETTKS
QDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFR
LTNRNIIHKPAEWTLIAMVLLSLLTPILGIQKHSQEGMVFTRFLDTLLEELHLKNEDLES
LTIIFRTSCLPE

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE9395 Download

>pFN21AE9395  6541 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCGGACTTCGCTGGGCCGTCTTCTGCCGGCCG
CAAGGCCGGGGCTCCCCGCTGCTCTCGAAAAGCCGCAGGTACTAAACAGACAAGTACTTT
GAAACAAGAAGATGCTTCTAAAAGGAAAGCTGAACTAGAAGCAGCTGTGAGAAAGAAGAT
TGAATTTGAGAGAAAAGCTCTACATATTGTTGAACAGCTTTTAGAGGAGAATATTACAGA
AGAGTTCCTAATGGAGTGTGGGAGGTTCATTACACCTGCTCACTACAGTGATGTCGTGGA
TGAACGTTCTATTGTCAAACTCTGTGGTTATCCTTTATGTCAGAAGAAGCTGGGAATTGT
ACCAAAACAGAAATATAAAATTTCTACCAAAACCAATAAAGTCTATGATATTACTGAAAG
AAAGTCTTTTTGCAGCAATTTTTGTTATCAAGCATCTAAGTTTTTTGAAGCACAAATTCC
CAAAACTCCAGTATGGGTTCGAGAAGAAGAGAGGCATCCTGATTTTCAACTGCTAAAGGA
AGAACAAAGTGGCCATTCTGGAGAAGAAGTACAGTTATGCAGTAAAGCCATTAAAACATC
AGATATCGACAATCCTAGCCACTTTGAAAAGCAATATGAATCTAGTTCTTCTAGCACTCA
CAGTGATAGTAGCAGTGACAATGAGCAAGACTTTGTTTCCTCCATTCTACCAGGAAACAG
ACCAAATTCAACAAATATTAGACCACAGCTGCACCAAAAAAGCATAATGAAAAAGAAAGC
TGGTCACAAAGCTAACTCCAAACACAAAGACAAAGAACAGACAGTAGTAGATGTCACTGA
GCAGTTAGGCGATTGCAAATTAGATAGTCAGGAGAAAGATGCTACATGTGAACTTCCTTT
ACAGAAAGTAAATACTCAGAGTTCTTCAAATAGCACTTTGCCTGAAAGATTAAAAGCGTC
AGAAAATTCTGAAAGTGAATACAGTAGGTCAGAAATAACTCTAGTAGGCATAAGTAAGAA
AAGTGCAGAGCATTTTAAGAGAAAATTTGCCAAATCAAACCAAGTGTCTAGGTCAGTGTC
TAGTTCAGTGCAGGTGTGTCCTGAAGTTGGAAAGAGAAACTTACTTAAAGTTTTGAAGGA
GACTTTGATTGAGTGGAAGACAGAAGAAACATTGAGGTTTTTGTATGGCCAGAATTATGC
TTCTGTGTGTCTGAAACCCGAAGCCTCTCTGGTTAAAGAAGAACTTGATGAAGATGACAT
AATCTCAGATCCAGATAGTCATTTCCCTGCCTGGAGGGAATCTCAGAACAGCTTGGATGA
GTCTTTACCTTTTAGGGGCTCAGGTACAGCCATTAAACCACTGCCAAGTTACGAGAATTT
GAAAAAAGAAACTGAAAAGTTAAATCTGAGGATCAGGGAGTTTTACAGAGGACGGTATGT
TTTGGGTGAAGAAACCACCAAATCACAAGACTCAGAAGAGCATGATTCCACCTTTCCACT
GATAGACTCAAGTTCCCAGAACCAGATTAGAAAACGCATCGTACTTGAAAAGTTGAGTAA
AGTGTTGCCTGGGCTTCTGGTTCCTCTTCAGATTACATTGGGAGATATTTACACACAACT
TAAAAATCTTGTTCGAACTTTCAGGTTAACAAATAGAAATATTATACACAAACCTGCGGA
ATGGACTTTAATTGCTATGGTGTTGCTGTCATTACTGACCCCAATTCTTGGCATTCAGAA
ACATTCTCAGGAAGGTATGGTGTTTACACGGTTTCTAGACACCCTCCTTGAAGAATTACA
TCTAAAAAATGAAGACCTTGAAAGTCTAACCATCATATTTAGAACCAGCTGTTTACCAGA
GGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
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