Gene/Protein Characteristic Table for KIAA0136
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Product ID ORK06020
Accession No D50926
Description MORC family CW-type zinc finger 3
Clone name ha03621s1
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (4197 bp)
Predicted protein sequence (950 aa)
Flexi ORF Clone FXC06020
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0136 by Kazusa Mouse cDNA Project
Note We replaced ha03621, former representative clones for KIAA0136 with ha03621s1. (2008/8/27)
Features of the cloned cDNA sequence
Description

Length: 4197 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 1342 bp
Genome contig ID gi51511750f_36514398
PolyA signal sequence
(AATAAA,-28)
+----*----+----*----+----*----+----
ATAATAAAATAAAAATATATGATGGCTAACTGTTC
Flanking genome sequence
(156410 - 156459)
----+----*----+----*----+----*----+----*----+----*
AAATGCTACTTTTAAAGACTTAATATTAACCTCAAATTATTTTAAAACTA
Features of the protein sequence
Description

Length: 950 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14149 0 100.0 MORC family CW-...
Homo sapiens
AAH94779 0 99.9 MORC family CW-...
Homo sapiens
AAI32732 0 99.9 MORC3 protein [...
Homo sapiens
XP_514887 0 99.7 MORC family CW-...
Pan troglodytes
EAX09742 0 99.6 MORC family CW-...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB020659 5.5e-11 25.2 KIAA0852
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR003594 35 97 PF02518 ATP-binding region
IPR011124 419 464 PF07496 Zinc finger
ProfileScan IPR011124 415 465 PS51050 Zinc finger
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 21
Experimental conditions
Panel name Stanford G3
Primer_f CGACAATGGGAATGGTATGAC
Primer_r TGCTCCGCTTTTATGACTTTC
PCR product length 228 (0.9k) bp
PCR conditions 95 °C15 sec66 °C120 sec30 cycles
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