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Gene/Protein Characteristic Table for KIAA0358

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Product ID	ORK00059
Accession No	AB002356
Description	MAP-kinase activating death domain, transcript variant 7
Clone name	hh00017
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5942 bp) Predicted protein sequence (1584 aa)
HaloTag ORF Clone	FHC00059
Flexi ORF Clone	FXC00059
Source	Human adult brain
Rouge ID	mKIAA0358 by Kazusa Mouse cDNA Project

Length: 5942 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1584 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR005113	11	101	PF03456	uDENN
	IPR001194	175	405	PF02141	DENN
	IPR005112	488	561	PF03455	dDENN
HMMSmart	IPR005113	11	101	SM00800	uDENN
	IPR001194	175	405	SM00799	DENN
	IPR005112	488	558	SM00801	dDENN
ProfileScan	IPR005113	11	107	PS50946	uDENN
	IPR001194	175	405	PS50211	DENN
	IPR005112	488	561	PS50947	dDENN

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	303	PLELLGVDACLQVLTCILLEHKV	325	PRIMARY	23
	2	336	SMSVMAFVAMIYPLEYMFPVIPL	358	PRIMARY	23
	3	369	LLLAPTPYIIGVPASFFLYKLDF	391	SECONDARY	23

RT-PCR

Experimental conditions

Chromosome No. 11
Experimental conditions

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