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Gene/Protein Characteristic Table for KIAA0404

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Product ID	ORK00066
Accession No	AB007864
Description	autophagy related 2A
Clone name	hg01236
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector. This cDNA clone hg01236 has an irregular adapter sequence (GTCGACCCAC GCGTCCGCCC ACGCGTCCG) instead of regular one (GTCGACCCAC GCGTCCG).
cDNA sequence	DNA sequence (6299 bp) Predicted protein sequence (1956 aa)
HaloTag ORF Clone	FHC00066
Flexi ORF Clone	FXC00066
Source	Human adult brain
Rouge ID	mKIAA0404 by Kazusa Mouse cDNA Project

Length: 6299 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1956 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR015412	1853	1950	PF09333	ATG2
ScanRegExp	IPR006093	1289	1322	PS00862	Oxygen oxidoreductase covalent FAD-binding site
	IPR002328	1894	1908	PS00059	Alcohol dehydrogenase

RT-PCR

Experimental conditions

Chromosome No. 11
Experimental conditions

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