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Gene/Protein Characteristic Table for KIAA0777

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Product ID	ORK01120
Accession No	AB018320
Description	sorbin and SH3 domain containing 2, transcript variant 2
Clone name	hk05279
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector. This cDNA clone hk05279 has an irregular adapter sequence (GTCGACCCAC GCGTCCGCCC ACGCGTCCG) instead of regular one (GTCGACCCAC GCGTCCG).
cDNA sequence	DNA sequence (4118 bp) Predicted protein sequence (1171 aa)
HaloTag ORF Clone	FHC01120
Flexi ORF Clone	FXC01120
Source	Human adult brain
Rouge ID	mKIAA0777 by Kazusa Mouse cDNA Project

Length: 4118 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1171 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR003127	161	299	PD016158	Sorbin-like
	IPR001452	939	989	PD000066	Src homology-3
	IPR001452	1014	1066	PD000066	Src homology-3
	IPR001452	1117	1168	PD000066	Src homology-3
FPrintScan	IPR001452	937	947	PR00452	Src homology-3
	IPR001452	951	966	PR00452	Src homology-3
	IPR000108	989	1006	PR00499	Neutrophil cytosol factor 2
	IPR000108	1027	1046	PR00499	Neutrophil cytosol factor 2
	IPR001452	1056	1068	PR00452	Src homology-3
	IPR000108	1117	1137	PR00499	Neutrophil cytosol factor 2
	IPR000108	1137	1153	PR00499	Neutrophil cytosol factor 2
HMMPfam	IPR003127	138	187	PF02208	Sorbin-like
	IPR001452	937	991	PF00018	Src homology-3
	IPR001452	1012	1068	PF00018	Src homology-3
	IPR001452	1115	1171	PF00018	Src homology-3
HMMSmart	IPR003127	138	188	SM00459	Sorbin-like
	IPR001452	937	992	SM00326	Src homology-3
	IPR001452	1012	1069	SM00326	Src homology-3
	IPR001452	1115	1171	SM00326	Src homology-3
ProfileScan	IPR003127	137	198	PS50831	Sorbin-like
	IPR001452	934	993	PS50002	Src homology-3
	IPR001452	1009	1070	PS50002	Src homology-3
	IPR001452	1112	1171	PS50002	Src homology-3
ScanRegExp	IPR007087	728	750	PS00028	Zinc finger

RT-PCR-ELISA

Experimental conditions

Chromosome No. 4
Experimental conditions

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