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Order Kazusa clone(s) from : |
| Product ID | ORK04095 |
|---|---|
| Accession No | AB028994 |
| Description | angiomotin, transcript variant 2 |
| Clone name | hj05664s2 |
| Vector information | |
| cDNA sequence | DNA sequence (5667 bp) Predicted protein sequence (675 aa) |
| Source | Human adult brain |
| Rouge ID |
mKIAA1071
by Kazusa Mouse cDNA Project
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| Note | We replaced hj05664 and hj05664s1, former representative clones for KIAA1071 with hj05664s2. (2002/5/10,2003/4/2) |
Length: 5667 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | Warning | No warning |
Integrity of 3' end
| Length of 3'UTR | 3639 bp |
|---|---|
| Genome contig ID | gi89161218r_111804812 |
| PolyA signal sequence (AATAAA,-25) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 675 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR009114 | 74 | 92 | PR01807 | Angiomotin |
| IPR009114 | 97 | 112 | PR01807 | Angiomotin | |
| IPR009114 | 187 | 201 | PR01807 | Angiomotin | |
| IPR009114 | 203 | 220 | PR01807 | Angiomotin | |
| IPR009114 | 262 | 279 | PR01807 | Angiomotin | |
| IPR009114 | 283 | 300 | PR01807 | Angiomotin | |
| IPR009114 | 348 | 363 | PR01807 | Angiomotin |
Experimental conditions| Primer_f | TAGGAAAGATACCCAGAGACC |
|---|---|
| Primer_r | CCGCATTATGAGGGTTTAGGC |
| PCR conditions | 95 °C 30 sec 55 °C 30 sec 72 °C 60 sec 30 cycles![]() |
Chromosome No. X
Experimental conditions| Panel name | CCR |
|---|---|
| Primer_f | TAGGAAAGATACCCAGAGACC |
| Primer_r | CCGCATTATGAGGGTTTAGGC |
| PCR product length | 137 bp |
| PCR conditions | 95 °C 15 sec 64 °C 60 sec 30 cycles |