FLJ00115

Product ID	ORK05082
Accession No	AK024505
Clone name	as00115
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4890 bp) Predicted protein sequence (757 aa)
Source	Human spleen

	N-terminal truncation	Coding interruption
cloned DNA seq	No warning	Warning

Length: 757 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAB15795	100.0	FLJ00115 protei...	Homo sapiens
EAW74579	99.9	F-box and leuci...	Homo sapiens
Q9Y2K7	99.9	JmjC domain-con...	Homo sapiens
AAH47371	99.6	FBXL11 protein ...	Homo sapiens
XP_540823	99.2	similar to F-bo...	Canis lupus fam...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB023221	2.6e-199	99.9	KIAA1004

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR002857	158	204	PF02008	Zn-finger
HMMPfam	IPR001810	485	530	PF00646	Cyclin-like F-box
HMMSmart	IPR001965	214	271	SM00249	Zn-finger-like
	IPR006553	595	620	SM00367	Leucine-rich repeat
	IPR006553	658	686	SM00367	Leucine-rich repeat
	IPR006553	690	713	SM00367	Leucine-rich repeat
ProfileScan	IPR001965	212	273	PS50016	Zn-finger-like
	NULL	445	467	PS50313	NULL
	IPR007089	637	721	PS50501	Leucine-rich repeat
ScanRegExp	IPR006058	172	180	PS00197	2Fe-2S ferredoxin
ScanRegExp	IPR001965	215	270	PS01359	Zn-finger-like

Primer_f
Primer_r
PCR conditions	test