Gene/Protein Characteristic Table for KIAA0519
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK00091
Accession No AB011091
Description exostosin-like glycosyltransferase 3, transcript variant 1
Clone name hg01237
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (6189 bp)
Predicted protein sequence (931 aa)
Flexi ORF Clone FXC00091
Source Human adult brain
Rouge ID mKIAA0519 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 6189 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Features of the protein sequence
Description

Length: 931 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
O43909 0 100.0 Exostosin-like ...
Homo sapiens
AAP88894 0 100.0 exostoses (mult...
synthetic construct
XP_001166624 0 99.9 Reg receptor is...
Pan troglodytes
XP_001166594 0 99.3 Reg receptor is...
Pan troglodytes
XP_001495917 0 98.7 exostoses (mult...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR004263 208 524 PF03016 Exostosin-like
IPR015338 675 916 PF09258 EXTL2

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 41 LTWLSFTLFVILVFFPLIAHYYL 63 PRIMARY 23
Expression profile
Description

RT-PCR
Experimental conditions
Primer_f TTTAGTGGAGCCAGGTTGTCG
Primer_r CCTGCGGCATGTTTTGGTGTC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 8
Experimental conditions
Panel name GeneBridge 4
Primer_f GCGCACTCCCAGAAAGATCCC
Primer_r CATAACACCGTCCCAGGGCTC
PCR product length 140 bp
PCR conditions 95 °C15 sec68 °C60 sec30 cycles
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT kazusa.or.jp