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Gene/Protein Characteristic Table for KIAA0414

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Product ID	ORK00530
Accession No	AB007874
Description	zinc finger and BTB domain containing 43, transcript variant 1
Clone name	hh00161
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5725 bp) Predicted protein sequence (492 aa)
HaloTag ORF Clone	FHC00530
Flexi ORF Clone	FXC00530
Source	Human adult brain
Rouge ID	mKIAA0414 by Kazusa Mouse cDNA Project

Length: 5725 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 492 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR007087	425	448	PD000003	Zinc finger
HMMPfam	IPR013069	48	152	PF00651	BTB/POZ
	IPR007087	398	419	PF00096	Zinc finger
	IPR007087	425	447	PF00096	Zinc finger
	IPR007087	453	475	PF00096	Zinc finger
HMMSmart	IPR000210	58	152	SM00225	BTB/POZ-like
	IPR015880	398	419	SM00355	Zinc finger
	IPR015880	425	447	SM00355	Zinc finger
	IPR015880	453	473	SM00355	Zinc finger
ProfileScan	IPR000210	58	122	PS50097	BTB/POZ-like
	IPR007087	398	424	PS50157	Zinc finger
	IPR007087	425	452	PS50157	Zinc finger
	IPR007087	453	482	PS50157	Zinc finger
ScanRegExp	IPR007087	427	447	PS00028	Zinc finger

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	4	IFGLEFVLIFLSLVAPNKICDEM	26	PRIMARY	23

RT-PCR

Experimental conditions

Chromosome No. 9
Experimental conditions

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