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Gene/Protein Characteristic Table for KIAA0385

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Product ID	ORK00524
Accession No	AB002383
Description	zinc finger, MYM-type 3, transcript variant 2
Clone name	hh00802
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5492 bp) Predicted protein sequence (1380 aa)
HaloTag ORF Clone	FHC00524
Flexi ORF Clone	FXC00524
Source	Human adult brain
Rouge ID	mKIAA0385 by Kazusa Mouse cDNA Project

Length: 5492 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 1380 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR010507	342	376	PF06467	Zinc finger
	IPR010507	388	432	PF06467	Zinc finger
	IPR010507	439	474	PF06467	Zinc finger
	IPR010507	487	521	PF06467	Zinc finger
	IPR010507	531	569	PF06467	Zinc finger
	IPR010507	577	614	PF06467	Zinc finger
	IPR010507	622	656	PF06467	Zinc finger
	IPR010507	663	702	PF06467	Zinc finger
	IPR010507	709	743	PF06467	Zinc finger
HMMSmart	IPR011017	321	357	SM00746	TRASH
	IPR011017	363	403	SM00746	TRASH
	IPR011017	419	454	SM00746	TRASH
	IPR011017	461	502	SM00746	TRASH
	IPR011017	508	546	SM00746	TRASH
	IPR011017	556	592	SM00746	TRASH
	IPR011017	601	637	SM00746	TRASH
	IPR011017	643	678	SM00746	TRASH
	IPR011017	689	724	SM00746	TRASH
	IPR011017	730	765	SM00746	TRASH

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	872	PQVIVLPIPVPIFVPVPMHLYC	893	PRIMARY	22
	2	895	KVPVPFSMPIPVPVPMFLPTTLE	917	SECONDARY	23

RT-PCR

Experimental conditions

Chromosome No. X
Experimental conditions

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