Gene/Protein Characteristic Table for KIAA0695
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Product ID ORK04683
Accession No AB014595
Description cullin 4B
Clone name hk04006s1
Vector information
The cDNA fragment was originally inserted at SalI-NotI site ...
cDNA sequence DNA sequence (4490 bp)
Predicted protein sequence (781 aa)
Source Human adult brain
Rouge ID mKIAA0695 by Kazusa Mouse cDNA Project
Note We replaced hk04006, former representative clones for KIAA0695 with hk04006s1. (2002/5/10)
Features of the cloned cDNA sequence
Description

Length: 4490 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2144 bp
Genome contig ID gi89161218r_119442502
PolyA signal sequence
(AATAAA,-16)
+----*----+----*----+----*----+----
GGTGGTTCTATTTTTCTCCAATAAAACTTTTATTT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAGTTTCTAGAGAAGATCTTTAAAATTCAAGTATTGTAAGAAAGT
Features of the protein sequence
Description

Length: 781 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q13620 0 100.0 Cullin-4B; Shor...
Homo sapiens
EAX11880 0 100.0 cullin 4B, isof...
Homo sapiens
CAI41370 0 100.0 cullin 4B [Homo...
Homo sapiens
XP_001086195 0 100.0 cullin 4B isofo...
Macaca mulatta
AAR13073 0 99.9 cullin 4B [Homo...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB014517 2.1e-44 38.2 KIAA0617
AB037827 9.8e-07 27.8 KIAA1406
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001373 85 683 PF00888 Cullin
HMMSmart IPR001373 456 604 SM00182 Cullin
ProfileScan IPR001373 426 654 PS50069 Cullin
ScanRegExp IPR001373 754 781 PS01256 Cullin
Expression profile
Description

RT-PCR
Experimental conditions
Primer_f ACCGGACCATCAACAACAGTG
Primer_r GGACCCGCTTTCAAGATACTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 10
Experimental conditions
Panel name GeneBridge 4
Primer_f ACCGGACCATCAACAACAGTG
Primer_r GGACCCGCTTTCAAGATACTG
PCR product length 159 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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