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Gene/Protein Characteristic Table for FLJ00412

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Product ID	ORK05196
Accession No	AK122587
Clone name	sf00011
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (3285 bp) Predicted protein sequence (749 aa)
Source	Human spleen

Length: 3285 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 749 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000008	333	411	PF00168	C2 domain
	IPR001936	506	678	PF00616	Ras GTPase-activating protein
HMMSmart	IPR001936	434	749	SM00323	Ras GTPase-activating protein
ProfileScan	IPR000694	123	160	PS50099	Proline-rich region
	IPR001936	485	677	PS50018	Ras GTPase-activating protein

Experimental conditions

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