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Gene/Protein Characteristic Table for FLJ00275

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Product ID	ORK05829
Accession No	AK090399
Clone name	sh00566
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5546 bp) Predicted protein sequence (382 aa)
Source	Human spleen

Length: 5546 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 382 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR007110	128	188	PF00047	Immunoglobulin-like
	IPR007110	228	288	PF00047	Immunoglobulin-like
HMMSmart	IPR003599	25	109	SM00409	Immunoglobulin subtype
	IPR003598	31	96	SM00408	Immunoglobulin C-2 type
	IPR003599	120	208	SM00409	Immunoglobulin subtype
	IPR003598	126	193	SM00408	Immunoglobulin C-2 type
	IPR003599	220	309	SM00409	Immunoglobulin subtype
ProfileScan	IPR007110	18	112	PS50835	Immunoglobulin-like

Experimental conditions

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