Gene/Protein Characteristic Table for FLJ00276
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Product ID ORK05014
Accession No AK131079
Clone name sh00612
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5772 bp)
Predicted protein sequence (426 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 5772 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Features of the protein sequence
Description

Length: 426 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC85129 5.8e-173 100.0 FLJ00276 protei...
Homo sapiens
EAX03932 9.2e-33 100.0 FYVE, RhoGEF an...
Homo sapiens
ABM84538 1.4e-32 100.0 FYVE, RhoGEF an...
synthetic construct
AAH23645 1.4e-32 100.0 FYVE, RhoGEF an...
Homo sapiens
Q7Z6J4 1.4e-32 100.0 FYVE, RhoGEF an...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AK000004 2.9e-05 38.9 FLJ00004
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
ProfileScan IPR001849 1 93 PS50003 Pleckstrin-like
NULL 168 278 PS50316 NULL
NULL 171 288 PS50319 NULL
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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