• NEDO
  Top page Gene List

Gene/Protein Characteristic Table for FLJ00277

Order Kazusa clone(s) from : Japan || Other countries

Product ID	ORK04334
Accession No	AK090400
Clone name	sh01540
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5074 bp) Predicted protein sequence (357 aa)
Source	Human spleen
Rouge ID	mFLJ00277 by Kazusa Mouse cDNA Project

Length: 5074 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 357 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	40	SYLAAFAIMVIFTLSVSMLLRYS	62	PRIMARY	23
	2	74	LQMLEMNMAIAFPAAPLLTVILA	96	PRIMARY	23
	3	104	MSEFFNDTTTAFYIILIVWLADQ	126	SECONDARY	23
	4	165	SLALVTSWLFIQHSMIYFFHHYE	187	SECONDARY	23

Experimental conditions

Order Kazusa clone(s) from : Japan || Other countries
Back to the NEDO Protein Database homepage
Send a message to office AT kazusa.or.jp