Gene/Protein Characteristic Table for FLJ00280
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Product ID ORK05146
Accession No AK131081
Clone name sh01728
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5562 bp)
Predicted protein sequence (440 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 5562 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Features of the protein sequence
Description

Length: 440 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC85131 1e-132 100.0 FLJ00280 protei...
Homo sapiens
ACB65495 1.1e-13 31.9 type VI secreti...
Burkholderia am...
ABU56803 3.2e-13 31.2 conserved hypot...
Roseiflexus cas...
EDJ99579 1.4e-12 30.4 hypothetical pr...
Magnaporthe gri...
P13983 2e-11 34.3 Extensin; Cell ...
Nicotiana tabacum
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
ProfileScan IPR000694 21 295 PS50099 Proline-rich region
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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