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Gene/Protein Characteristic Table for FLJ00315

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Product ID	ORK00941
Accession No	AK090415
Clone name	sh06842
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5141 bp) Predicted protein sequence (925 aa)
HaloTag ORF Clone	FHC00941
Flexi ORF Clone	FXC00941
Source	Human spleen

Length: 5141 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 925 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR000104	150	164	PR00308	Antifreeze protein
	IPR000104	164	175	PR00308	Antifreeze protein
HMMPfam	IPR004181	601	653	PF02891	Zn-finger
ProfileScan	NULL	52	137	PS50315	NULL
	NULL	152	175	PS50310	NULL
	IPR000694	206	408	PS50099	Proline-rich region
	IPR000694	730	911	PS50099	Proline-rich region

Experimental conditions

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