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Gene/Protein Characteristic Table for FLJ00407

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Product ID	ORK05984
Accession No	AK160384
Clone name	sj08554
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4329 bp) Predicted protein sequence (591 aa)
Source	Human spleen
Rouge ID	mFLJ00407 by Kazusa Mouse cDNA Project

Length: 4329 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 591 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR001781	221	274	PD000094	Zn-binding protein
HMMPfam	IPR001715	34	136	PF00307	Calponin-like actin-binding
	IPR001781	221	279	PF00412	Zn-binding protein
HMMSmart	IPR001715	34	131	SM00033	Calponin-like actin-binding
	IPR001781	220	274	SM00132	Zn-binding protein
ProfileScan	IPR001715	32	133	PS50021	Calponin-like actin-binding
	IPR001781	219	281	PS50023	Zn-binding protein
	IPR000694	289	358	PS50099	Proline-rich region
ScanRegExp	IPR001781	221	255	PS00478	Zn-binding protein

Experimental conditions

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