HUGE

Gene/Protein Characteristic Table for KIAA0512

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00090
Accession No. :	AB011084
Description :	Armadillo repeat-containing X-linked protein 2.
HUGO Gene Name :	armadillo repeat containing, X-linked 2 (ARMCX2)
Clone Name :	hf00239 [Vector Info]
Flexi ORF Clone :	pF1KA0512
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 2620 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Features of the protein sequence	Description

Length: 710 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
Q7L311	1.3e-164	100.0	Armadillo repea...	Homo sapiens
BAF84031	5.5e-164	99.7	unnamed protein...	Homo sapiens
XP_001095909	1.8e-161	98.1	similar to ALEX...	Macaca mulatta
CAH89455	7.8e-157	96.4	hypothetical pr...	Pongo abelii
XP_001492970	2.8e-103	84.3	similar to ALEX...	Equus caballus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB007903	3.5e-05	28.4	KIAA0443
AB051488	0.00015	22.3	KIAA1701

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR006911 443 704 PF04826 Protein of unknown function DUF634

HMMSmart IPR000225 494 535 SM00185 Armadillo

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR006911	443	704	PF04826	Protein of unknown function DUF634
HMMSmart	IPR000225	494	535	SM00185	Armadillo

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 83 RDAGCVAAGIVIGAGAWYCVYKY 105 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	83	RDAGCVAAGIVIGAGAWYCVYKY	105	PRIMARY	23

Expression profile	Description

: RT-PCR Description

Experimental conditions

Primer_f
: CGTGCGTTTAACCCAGGCGAG

Primer_r
: CTGCTGGCCTTCTATGCGCTG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR	Description

RH mapping information	Description

Chromosome No.

: X

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: CGTGCGTTTAACCCAGGCGAG
Primer_r	: CTGCTGGCCTTCTATGCGCTG
PCR product length	: 136 bp
PCR conditions	: 95 °C15 sec68 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Gene/Protein Characteristic Table for KIAA0512

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information