HUGE

Gene/Protein Characteristic Table for KIAA0668

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK00600
Accession No. :	AB014568
Description :	Sad1/unc-84-like protein 2.
HUGO Gene Name :
Clone Name :	hk02329 [Vector Info]
Flexi ORF Clone :	pF1KSDA0668
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 3767 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Features of the protein sequence	Description

Length: 742 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAG65068	99.9	unnamed protein...	Homo sapiens
XP_515135	98.5	unc-84 homolog ...	Pan troglodytes
Q9UH99	100.0	Protein unc-84 ...	Homo sapiens
CAD97926	99.9	hypothetical pr...	Homo sapiens
BAF82433	99.6	unnamed protein...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB018353	3.9e-38	34.5	KIAA0810

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR012919 606 740 PF07738 Sad1/UNC-like

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR012919	606	740	PF07738	Sad1/UNC-like

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 201 LFRLLYWWAGTTWYRLTTAASLL 223 SECONDARY 23

2 225 VFVLTRRFSSLKTFLWFLLPLLL 247 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	201	LFRLLYWWAGTTWYRLTTAASLL	223	SECONDARY	23
2	225	VFVLTRRFSSLKTFLWFLLPLLL	247	PRIMARY	23

Expression profile	Description

: RT-PCR Description
: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: TTGCAGCTCTTGTTCAGGTAG

Primer_r
: TAACTTCTGCCAGCCTCTTCC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR	Description

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 22

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: TTGCAGCTCTTGTTCAGGTAG
Primer_r	: TAACTTCTGCCAGCCTCTTCC
PCR product length	: 88 bp
PCR conditions	: 95 °C15 sec64 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Gene/Protein Characteristic Table for KIAA0668

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information