HUGE

Gene/Protein Characteristic Table for KIAA1001

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK01621
Accession No. :	AB023218
Description :	Arylsulfatase G precursor.
HUGO Gene Name :	arylsulfatase G (ARSG)
Clone Name :	hk09652 [Vector Info]
Flexi ORF Clone :	pF1KSDA1001
Source :	Human adult brain

Features of the cloned DNA sequence	Description

Length: 4304 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO
Ensembl ContigView (Add our DAS server as a DAS source)
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Features of the protein sequence	Description

Length: 551 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAG09935	0	100.0	arylsulfatase G...	synthetic construct
Q96EG1	0	99.8	Arylsulfatase G...	Homo sapiens
AAQ88746	0	99.4	GWLF839 [Homo s...	Homo sapiens
XP_001494339	1e-192	87.2	similar to aryl...	Equus caballus
Q32KH9	6e-192	86.6	Arylsulfatase G...	Canis lupus fam...

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB033073	8.3e-05	22.4	KIAA1247

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR000917 60 419 PF00884 Sulphatase

ScanRegExp IPR000917 108 120 PS00523 Sulphatase

IPR000917 155 165 PS00149 Sulphatase

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000917	60	419	PF00884	Sulphatase
ScanRegExp	IPR000917	108	120	PS00523	Sulphatase
IPR000917	155	165	PS00149	Sulphatase

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 29 WLFLKVLLAGVSFSGFLYPLVDF 51 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	29	WLFLKVLLAGVSFSGFLYPLVDF	51	PRIMARY	23

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: GAAAGAGGTGGTGCGGAGTAC

Primer_r
: TGACAGCGGCAGGCAATTTGG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 17

Experimental conditions

Panel name	: UniGene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Primer_f	: GAAAGAGGTGGTGCGGAGTAC
Primer_r	: TGACAGCGGCAGGCAATTTGG
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1001

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information