HUGE

Gene/Protein Characteristic Table for KIAA1241

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK05645
Accession No. :	AB033067
Description :	transcription factor-like nuclear regulator.
HUGO Gene Name :
Clone Name :	fh10384 [Vector Info]
Source :	Human fetal brain
Note :	Please refer to "Gene/Protein Characteristic Table for KIAA1689" because the cDNA sequence of KIAA1241 is included in KIAA1689.

Features of the cloned DNA sequence	Description

Length: 5755 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
NO

Features of the protein sequence	Description

Length: 863 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
AAG30220	99.3	RNA polymerase ...	Homo sapiens
AAG30221	99.4	RNA polymerase ...	Homo sapiens
A6H8Y1	96.9	Transcription f...	Homo sapiens
AAI61615	96.8	BDP1 protein [H...	Homo sapiens
AAI46793	96.8	B double prime ...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB051476	4.1e-168	96.8	KIAA1689

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

None - - - - -

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 1 KIIIKYISLGILFSLKYFLFFSN 23 PRIMARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	1	KIIIKYISLGILFSLKYFLFFSN	23	PRIMARY	23

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: CTTCAGATTTGCCTTCATTCG

Primer_r
: GGAAGCGACCTCTCAACATTG

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 5

Experimental conditions

Panel name	: GeneBridge 4
Primer_f	: CTTCAGATTTGCCTTCATTCG
Primer_r	: GGAAGCGACCTCTCAACATTG
PCR product length	: 159(2k) bp
PCR conditions	: 95 °C15 sec62 °C60 sec30 cycles

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	NO

Gene/Protein Characteristic Table for KIAA1241

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information