HUGE

Gene/Protein Characteristic Table for KIAA1463

Link to : Rouge \| GTOP \| SWISS-PROT/TrEMBL \| GeneCards\| RefDIC
Features : DNA sequence \| Protein sequence \| Expression \| Mapping

Product ID :	ORK04776
Accession No. :	AB040896
Description :	DIP2 disco-interacting protein 2 homolog B.
HUGO Gene Name :	DIP2 disco-interacting protein 2 homolog B (Drosophila) (DIP2B)
Clone Name :	fh18591s1 [Vector Info]
Source :	Human fetal brain
Note :	We replaced fh18591, former representative clones for KIAA1463 with fh18591s1. (2003/8/28)

Features of the cloned DNA sequence	Description

Length: 7334 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
YES

Warning for coding interruption:
NO

Integrity of 3' end

Length of 3'UTR 3833 bp

Genome contig ID gi89161190f_49263212
PolyA signal sequence
(AATAAA,-34)
+----*----+----*----+----*----+----
TAATAAATATTGATGCCTGATTCTGTTTAAAAAAC
Flanking genome sequence
(165509 - 165558)
----+----*----+----*----+----*----+----*----+----*
CTTCACACATTGGGTGGAGGCTAGGGAATTGATAGATTTTAAATTTAACT

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class

ContigView(URL based/DAS) 12 f 49363212 49428719 29 99.4 Perfect prediction

Features of the protein sequence	Description

Length: 1166 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
Q9P265	100.0	Disco-interacti...	Homo sapiens
XP_509060	99.7	DIP2 disco-inte...	Pan troglodytes
XP_534802	99.3	similar to CG70...	Canis lupus fam...
XP_001082991	99.6	similar to DISC...	Macaca mulatta
XP_001082866	99.6	similar to DISC...	Macaca mulatta

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other HUGE database (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB023151	0	76.9	KIAA0934
D80006	0	77.2	KIAA0184

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method interpro_ID From To Entry Definition

HMMPfam IPR000873 612 1085 PF00501 AMP-dependent synthetase and ligase

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000873	612	1085	PF00501	AMP-dependent synthetase and ligase

Prediction of transmembrane (TM) segments

Method No. N terminal transmembrane region C terminal type length

SOSUI2 1 4 MFMVAFYGCLLAEVIPVPIEVPL 26 PRIMARY 23

2 35 QIGFLLGSCGIALALTSEVCLKG 57 SECONDARY 23

3 643 YPPGIELIAAFYGCLYAGCIPVT 665 PRIMARY 23

4 781 SSRQIAICLDPYCGLGFALWCLC 803 SECONDARY 23

5 1079 SIAECAVFTWTNLLVVVVELCGS 1101 PRIMARY 23

6 1111 LVTNVVLEEHYLIVGVVVVVDPG 1133 SECONDARY 23

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	4	MFMVAFYGCLLAEVIPVPIEVPL	26	PRIMARY	23
2	35	QIGFLLGSCGIALALTSEVCLKG	57	SECONDARY	23
3	643	YPPGIELIAAFYGCLYAGCIPVT	665	PRIMARY	23
4	781	SSRQIAICLDPYCGLGFALWCLC	803	SECONDARY	23
5	1079	SIAECAVFTWTNLLVVVVELCGS	1101	PRIMARY	23
6	1111	LVTNVVLEEHYLIVGVVVVVDPG	1133	SECONDARY	23

Expression profile	Description

: RT-PCR-ELISA Description
: Experimental conditions

Primer_f
: AGTAACTCTGGTAAAGCATCC

Primer_r
: TAATGTGGATAGAGTAGGAGC

PCR conditions
: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RT-PCR-ELISA	Description

RH mapping information	Description

Chromosome No.

: 12

Experimental conditions

Panel name	: unigene
Primer_f	: -
Primer_r	: -
PCR product length	: -
PCR conditions	: -

How to obtain KIAA clone(s) Back to the HUGE Protein Database homepage

	cloned DNA seq.
Warning for N-terminal truncation:	YES
Warning for coding interruption:	NO

Length of 3'UTR	3833 bp
Genome contig ID	gi89161190f_49263212
PolyA signal sequence (AATAAA,-34)	+--------+--------+----*----+---- TAATAAATATTGATGCCTGATTCTGTTTAAAAAAC
Flanking genome sequence (165509 - 165558)	----+--------+--------+--------+--------+----* CTTCACACATTGGGTGGAGGCTAGGGAATTGATAGATTTTAAATTTAACT

	Chr	f/r	start	end	exon	identity	class
ContigView(URL based/DAS)	12	f	49363212	49428719	29	99.4	Perfect prediction

Primer_f	: AGTAACTCTGGTAAAGCATCC
Primer_r	: TAATGTGGATAGAGTAGGAGC
PCR conditions	: 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

Gene/Protein Characteristic Table for KIAA1463

Features of the cloned DNA sequence

Features of the protein sequence

Expression profile

RH mapping information