SYT4 ORF clone FHC00217

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC00217

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AA1342 Sequence (with vector) Restriction Map

Product ID

FHC00217

Flexi Clone PID

FXC00217

ORF Sequence

DNA sequence (1275 bp)
Protein sequence (425 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385452]

Gene

KIAA1342

Symbol

SYT4

Alias : HsT1192

Description

synaptotagmin IV

Original Clone ID

fj00418

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1275 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 425 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11922.1 2.5e-156 100.0 SYT4 CCDS1122.1 3.4e-81 53.0 SYT11 CCDS58139.1 1.5e-40 37.8 SYT7 CCDS73298.1 3.2e-40 39.9 SYT7 CCDS31577.1 5.1e-40 37.5 SYT7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001565 157 172 PR00399 Synaptotagmin IPR001565 172 185 PR00399 Synaptotagmin IPR001565 229 244 PR00399 Synaptotagmin IPR001565 249 259 PR00399 Synaptotagmin HMMPfam IPR000008 171 257 PF00168 C2 calcium-dependent membrane targeting IPR000008 304 391 PF00168 C2 calcium-dependent membrane targeting HMMSmart IPR000008 169 273 SM00239 C2 calcium-dependent membrane targeting IPR000008 303 417 SM00239 C2 calcium-dependent membrane targeting ProfileScan IPR018029 170 258 PS50004 C2 membrane targeting protein IPR018029 302 392 PS50004 C2 membrane targeting protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 15 PTVVGIFSAFGLVFTVSLFAWIC 37 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_065834 425 600103 100.0 100.0 XP_005245071 430 608741 53.3 99.8 NP_689493 431 608741 53.0 99.8 XP_016856248 434 608741 52.9 99.8 NP_001238994 478 604146 37.8 90.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA1342 Download

>KIAA1342  1275 bp
ATGGCTCCGATCACCACCAGCCGGGAAGAATTTGATGAAATCCCCACAGTGGTGGGGATC
TTCAGTGCATTTGGCCTGGTCTTCACAGTCTCTCTCTTTGCATGGATCTGCTGTCAGAGA
AAATCATCCAAGTCTAACAAGACTCCTCCATACAAGTTTGTGCATGTGCTTAAGGGAGTT
GATATTTACCCTGAAAACCTAAATAGCAAAAAGAAGTTTGGAGCAGATGATAAAAATGAA
GTAAAGAATAAGCCAGCTGTGCCAAAGAATTCATTGCATCTGGATCTTGAAAAGAGAGAT
CTCAATGGCAATTTTCCCAAAACCAACCTCAAACCTGGCAGTCCTTCTGATCTGGAGAAT
GCAACCCCGAAGCTCTTTTTAGAAGGGGAAAAAGAGTCAGTTTCCCCTGAGAGTTTAAAG
TCCAGCACTTCCCTTACTTCAGAAGAGAAACAAGAGAAGCTGGGAACTCTCTTCTTCTCC
TTAGAATACAACTTCGAGAGAAAAGCATTTGTGGTCAATATCAAGGAAGCCCGTGGCTTG
CCAGCCATGGATGAGCAGTCGATGACCTCTGACCCATATATCAAAATGACGATCCTCCCA
GAGAAGAAGCATAAAGTGAAAACTAGAGTGCTGAGAAAAACCTTGGATCCAGCTTTTGAT
GAGACCTTTACATTCTATGGGATACCCTACACCCAAATCCAAGAATTGGCCTTGCACTTC
ACAATTTTGAGTTTTGACAGGTTTTCAAGAGATGATATCATTGGGGAAGTTCTAATTCCT
CTCTCGGGAATTGAATTATCTGAAGGAAAAATGTTAATGAATAGAGAGATCATCAAGAGA
AATGTTAGGAAGTCTTCAGGACGGGGTGAGTTACTGATCTCTCTCTGCTATCAGTCCACC
ACAAACACTCTAACTGTGGTTGTCTTAAAAGCTCGACATCTGCCTAAATCTGATGTGTCC
GGACTTTCAGATCCCTATGTCAAAGTGAACCTGTACCATGCCAAAAAGAGAATCTCCAAG
AAGAAGACTCATGTGAAGAAATGCACCCCCAATGCAGTGTTCAATGAGCTGTTTGTCTTT
GATATTCCTTGTGAGGGCCTTGAAGATATAAGTGTTGAATTTTTGGTTTTGGATTCTGAA
AGGGGGTCCCGAAATGAGGTAATCGGGCAGTTAGTCTTGGGTGCAGCAGCAGAAGGAACT
GGTGGAGAGCACTGGAAAGAGATCTGTGACTACCCCAGGAGACAAATTGCCAAGTGGCAC
GTGCTCTGTGATGGT

ORF Protein

Cloned ORF protein sequence for pFN21AA1342 Download

>KIAA1342  425 aa
MAPITTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVLKGV
DIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLNGNFPKTNLKPGSPSDLEN
ATPKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFSLEYNFERKAFVVNIKEARGL
PAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHF
TILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIKRNVRKSSGRGELLISLCYQST
TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVF
DIPCEGLEDISVEFLVLDSERGSRNEVIGQLVLGAAAEGTGGEHWKEICDYPRRQIAKWH
VLCDG

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA1342 Download

>pFN21AA1342  5980 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTCCGATCACCACCAGCCGGGAAGAATTTGA
TGAAATCCCCACAGTGGTGGGGATCTTCAGTGCATTTGGCCTGGTCTTCACAGTCTCTCT
CTTTGCATGGATCTGCTGTCAGAGAAAATCATCCAAGTCTAACAAGACTCCTCCATACAA
GTTTGTGCATGTGCTTAAGGGAGTTGATATTTACCCTGAAAACCTAAATAGCAAAAAGAA
GTTTGGAGCAGATGATAAAAATGAAGTAAAGAATAAGCCAGCTGTGCCAAAGAATTCATT
GCATCTGGATCTTGAAAAGAGAGATCTCAATGGCAATTTTCCCAAAACCAACCTCAAACC
TGGCAGTCCTTCTGATCTGGAGAATGCAACCCCGAAGCTCTTTTTAGAAGGGGAAAAAGA
GTCAGTTTCCCCTGAGAGTTTAAAGTCCAGCACTTCCCTTACTTCAGAAGAGAAACAAGA
GAAGCTGGGAACTCTCTTCTTCTCCTTAGAATACAACTTCGAGAGAAAAGCATTTGTGGT
CAATATCAAGGAAGCCCGTGGCTTGCCAGCCATGGATGAGCAGTCGATGACCTCTGACCC
ATATATCAAAATGACGATCCTCCCAGAGAAGAAGCATAAAGTGAAAACTAGAGTGCTGAG
AAAAACCTTGGATCCAGCTTTTGATGAGACCTTTACATTCTATGGGATACCCTACACCCA
AATCCAAGAATTGGCCTTGCACTTCACAATTTTGAGTTTTGACAGGTTTTCAAGAGATGA
TATCATTGGGGAAGTTCTAATTCCTCTCTCGGGAATTGAATTATCTGAAGGAAAAATGTT
AATGAATAGAGAGATCATCAAGAGAAATGTTAGGAAGTCTTCAGGACGGGGTGAGTTACT
GATCTCTCTCTGCTATCAGTCCACCACAAACACTCTAACTGTGGTTGTCTTAAAAGCTCG
ACATCTGCCTAAATCTGATGTGTCCGGACTTTCAGATCCCTATGTCAAAGTGAACCTGTA
CCATGCCAAAAAGAGAATCTCCAAGAAGAAGACTCATGTGAAGAAATGCACCCCCAATGC
AGTGTTCAATGAGCTGTTTGTCTTTGATATTCCTTGTGAGGGCCTTGAAGATATAAGTGT
TGAATTTTTGGTTTTGGATTCTGAAAGGGGGTCCCGAAATGAGGTAATCGGGCAGTTAGT
CTTGGGTGCAGCAGCAGAAGGAACTGGTGGAGAGCACTGGAAAGAGATCTGTGACTACCC
CAGGAGACAAATTGCCAAGTGGCACGTGCTCTGTGATGGTGTTTAAACGAATTCGGGCTC
GGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACA
AAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCC
TTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACA
ACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTT
GTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTT
CAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGT
AAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAG
TAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTT
TCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAA
TAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTT
TTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGAT
GCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAG
ATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTG
CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATA
CACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGAT
GGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCC
AACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATG
GGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC
GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACT
GGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAA
GTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCT
GGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCC
TCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA
CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAA
GCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAG
GGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA
AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATC
GACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCC
CTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCG
CCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTT
CGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC
GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGC
CACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAG
AGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCG
CTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAA
CCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG
GATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACT
CACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAT
AGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAA
AAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAG
GTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTG
CCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATT
AAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGT
ACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT