ATCAY ORF clone pFN21ASDA1872

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone pFN21ASDA1872

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Clone info.

Species

human

Clone Name

pFN21ASDA1872 Sequence (with vector) Restriction Map

Product ID

FHC00938

Flexi Clone PID

FXC00938

ORF Sequence

DNA sequence (1113 bp)
Protein sequence (371 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384313]

Gene

KIAA1872

Symbol

ATCAY

Alias : BNIP-H, CLAC

Description

ataxia, cerebellar, Cayman type

Original Clone ID

hj05518

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1113 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 371 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS45923.1 6.4e-154 100.0 ATCAY CCDS83375.1 9.3e-59 61.6 PRUNE2 CCDS47982.1 1.7e-58 61.0 PRUNE2 CCDS81889.1 8.5e-57 53.8 BNIP2 CCDS10174.2 9.6e-57 53.8 BNIP2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022181 59 191 PF12496 Bcl2-/adenovirus E1B 19kDa-interacting protein 2 IPR001251 244 314 PF00650 Cellular retinaldehyde-binding/triple function HMMSmart IPR001251 171 325 SM00516 Cellular retinaldehyde-binding/triple function ProfileScan IPR001251 171 328 PS50191 Cellular retinaldehyde-binding/triple function
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_149053 371 601238,608179 100.0 100.0 XP_006717047 3101 610691 57.6 93.3 XP_006717045 3104 610691 57.4 94.1 XP_011516628 3085 610691 60.7 86.3 XP_005251808 3075 610691 61.7 84.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21ASDA1872 Download

>KIAA1872  1113 bp
ATGGGGACCACCGAAGCCACGCTCCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAG
GACGAAGATCTTCCCAGGCCACTCCCAGAAGAGACGGGGGTGGAACTGCTTGGCAGCCCG
GTGGAAGACACATCCTCTCCTCCCAACACGCTAAATTTCAACGGAGCGCATCGTAAGAGG
AAGACGCTGGTGGCCCCAGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCTGCTG
TCCGATGACTTCTTGGATACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGACC
CCCGATGAGACCGACTCGCTGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGGAAGAC
GACACCCCCGTGGCCACCGCCAAGAACATGCCCGGGGACAGCGCGGATCTATTTGGGGAC
GGCACGACGGAGGACGGCAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGG
GAGCAAGAGCACCGTATAGACCTGCACATGATCCGGCCTTACATGAAAGTGGTCACCCAC
GGAGGGTACTACGGCGAAGGCCTCAACGCCATCATCGTCTTCGCAGCCTGCTTCCTTCCA
GACAGCAGCCTCCCCGACTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGC
AGCTTAGAGCTCCTGGTGGCTGAGGACTACATGATCGTGTACCTGAACGGTGCCACGCCC
CGGCGGAGGATGCCTGGAATCGGCTGGCTGAAGAAGTGCTACCAGATGATCGACCGGAGG
TTGCGGAAAAACCTGAAGTCCTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTG
CTGGCCATCTCTCGCCCTTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCAC
AGCTTGGAAGACCTGGAGCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTC
CTGCAATACGAAGAGGAAAGACTGAAGGCCAGGAGGGAGAGCGCGAGGCCCCAGCCGGAG
TTTGTGCTGCCCAGGTCTGAAGAGAAGCCAGAGGTGGCACCAGTGGAAAACAGGTCTGCT
CTGGTCTCAGAAGATCAGGAAACAAGCATGTCC

ORF Protein

Cloned ORF protein sequence for pFN21ASDA1872 Download

>KIAA1872  371 aa
MGTTEATLRMENVDVKEEWQDEDLPRPLPEETGVELLGSPVEDTSSPPNTLNFNGAHRKR
KTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNELEWED
DTPVATAKNMPGDSADLFGDGTTEDGSAANGRLWRTVIIGEQEHRIDLHMIRPYMKVVTH
GGYYGEGLNAIIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATP
RRRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVH
SLEDLEQLIPMEHVQIPDCVLQYEEERLKARRESARPQPEFVLPRSEEKPEVAPVENRSA
LVSEDQETSMS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21ASDA1872 Download

>pFN21ASDA1872  5842 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCTTTCGAAGGAGATAGAACCATGGGGACCACCGAAGC
CACGCTCCGGATGGAAAACGTGGACGTGAAGGAGGAATGGCAGGACGAAGATCTTCCCAG
GCCACTCCCAGAAGAGACGGGGGTGGAACTGCTTGGCAGCCCGGTGGAAGACACATCCTC
TCCTCCCAACACGCTAAATTTCAACGGAGCGCATCGTAAGAGGAAGACGCTGGTGGCCCC
AGAGATCAACATTTCTCTGGATCAGAGTGAGGGGTCCCTGCTGTCCGATGACTTCTTGGA
TACCCCTGATGACCTGGATATTAACGTGGATGACATCGAGACCCCCGATGAGACCGACTC
GCTGGAGTTCCTGGGGAATGGCAACGAACTGGAGTGGGAAGACGACACCCCCGTGGCCAC
CGCCAAGAACATGCCCGGGGACAGCGCGGATCTATTTGGGGACGGCACGACGGAGGACGG
CAGCGCCGCCAACGGGCGCCTGTGGCGGACAGTGATCATCGGGGAGCAAGAGCACCGTAT
AGACCTGCACATGATCCGGCCTTACATGAAAGTGGTCACCCACGGAGGGTACTACGGCGA
AGGCCTCAACGCCATCATCGTCTTCGCAGCCTGCTTCCTTCCAGACAGCAGCCTCCCCGA
CTACCACTACATCATGGAGAACCTCTTCCTGTACGTCATCAGCAGCTTAGAGCTCCTGGT
GGCTGAGGACTACATGATCGTGTACCTGAACGGTGCCACGCCCCGGCGGAGGATGCCTGG
AATCGGCTGGCTGAAGAAGTGCTACCAGATGATCGACCGGAGGTTGCGGAAAAACCTGAA
GTCCTTGATCATCGTCCACCCCTCGTGGTTCATTCGGACTGTGCTGGCCATCTCTCGCCC
TTTCATCAGCGTCAAGTTCATCAACAAGATCCAGTACGTGCACAGCTTGGAAGACCTGGA
GCAACTCATCCCTATGGAACACGTCCAGATCCCAGACTGCGTCCTGCAATACGAAGAGGA
AAGACTGAAGGCCAGGAGGGAGAGCGCGAGGCCCCAGCCGGAGTTTGTGCTGCCCAGGTC
TGAAGAGAAGCCAGAGGTGGCACCAGTGGAAAACAGGTCTGCTCTGGTCTCAGAAGATCA
GGAAACAAGCATGTCCTACGTAGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT