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Order Kazusa clone(s) from : |
| Product ID | ORK04764 |
|---|---|
| Accession No | D63479 |
| Description | diacylglycerol kinase, delta 130kDa |
| Clone name | hg01767 |
| Vector information | |
| cDNA sequence | DNA sequence (6238 bp) Predicted protein sequence (1198 aa) |
| Source | Human adult brain |
| Rouge ID |
mKIAA0145
by Kazusa Mouse cDNA Project
|
| Note | We replaced ha00914, former representative clones for KIAA0145 with hg01767. (2005/08/06) |
Length: 6238 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | Warning | No warning |
Integrity of 3' end
| Length of 3'UTR | 2640 bp |
|---|---|
| Genome contig ID | gi89161199f_233827952 |
| PolyA signal sequence (AATAAA,-28) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (217532 - 217581) |
----+----*----+----*----+----*----+----*----+----* |
Ensembl ContigView (Add our DAS server as a DAS source)
| Chr | f/r | start | end | exon | identity | class | |
|---|---|---|---|---|---|---|---|
|
| 2 | f | 233927951 | 234045482 | 30 | 99.5 | Perfect prediction |
Length: 1198 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR001206 | 306 | 401 | PD005043 | Diacylglycerol kinase |
| IPR000756 | 879 | 925 | PD002939 | Diacylglycerol kinase accessory region | |
| FPrintScan | IPR002219 | 161 | 170 | PR00008 | Protein kinase C |
| IPR002219 | 174 | 185 | PR00008 | Protein kinase C | |
| IPR002219 | 186 | 198 | PR00008 | Protein kinase C | |
| HMMPfam | IPR001849 | 38 | 130 | PF00169 | Pleckstrin-like |
| IPR002219 | 148 | 200 | PF00130 | Protein kinase C | |
| IPR002219 | 220 | 273 | PF00130 | Protein kinase C | |
| IPR001206 | 305 | 430 | PF00781 | Diacylglycerol kinase | |
| IPR000756 | 747 | 904 | PF00609 | Diacylglycerol kinase accessory region | |
| IPR011510 | 1126 | 1192 | PF07647 | Sterile alpha motif homology 2 | |
| HMMSmart | IPR001849 | 38 | 132 | SM00233 | Pleckstrin-like |
| IPR002219 | 148 | 197 | SM00109 | Protein kinase C | |
| IPR002219 | 220 | 270 | SM00109 | Protein kinase C | |
| IPR001206 | 305 | 430 | SM00046 | Diacylglycerol kinase | |
| IPR000756 | 747 | 904 | SM00045 | Diacylglycerol kinase accessory region | |
| IPR001660 | 1126 | 1192 | SM00454 | Sterile alpha motif SAM | |
| ProfileScan | IPR001849 | 37 | 130 | PS50003 | Pleckstrin-like |
| IPR002219 | 147 | 197 | PS50081 | Protein kinase C | |
| IPR002219 | 219 | 270 | PS50081 | Protein kinase C | |
| IPR001660 | 1129 | 1192 | PS50105 | Sterile alpha motif SAM | |
| ScanRegExp | IPR002219 | 148 | 197 | PS00479 | Protein kinase C |
| IPR002219 | 220 | 270 | PS00479 | Protein kinase C |
Chromosome No. 2
Experimental conditions| Panel name | Genebridge 4 |
|---|---|
| Primer_f | TGAGGAAGGAATGAACATGAG |
| Primer_r | AGCACTCAGGTATGGACTATG |
| PCR product length | 313 bp |
| PCR conditions | 95 °C 15 sec 60 °C 120 sec 30 cycles |