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Order Kazusa clone(s) from : |
| Product ID | ORK00555 |
|---|---|
| Accession No | AB011107 |
| Description | suppression of tumorigenicity 18, zinc finger |
| Clone name | hg03847 |
| Vector information | |
| cDNA sequence | DNA sequence (6183 bp) Predicted protein sequence (1047 aa) |
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HaloTag ORF Clone |
FHC00555
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| Flexi ORF Clone | FXC00555 |
| Source | Human adult brain |
| Rouge ID |
mKIAA0535
by Kazusa Mouse cDNA Project
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Length: 6183 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | No warning | No warning |
Length: 1047 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR002515 | 365 | 395 | PF01530 | Zinc finger |
| IPR002515 | 409 | 439 | PF01530 | Zinc finger | |
| IPR013681 | 478 | 716 | PF08474 | Myelin transcription factor 1 | |
| IPR002515 | 721 | 751 | PF01530 | Zinc finger | |
| IPR002515 | 765 | 795 | PF01530 | Zinc finger | |
| IPR002515 | 813 | 843 | PF01530 | Zinc finger | |
| IPR002515 | 866 | 896 | PF01530 | Zinc finger |
RT-PCR
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Experimental conditions| Primer_f | ACCCACCATAGGAAACAAGAC |
|---|---|
| Primer_r | TGAAGTGTGGATGAGTCTGTG |
| PCR conditions | 95 °C 30 sec 55 °C 30 sec 72 °C 60 sec 30 cycles![]() |
Chromosome No. 8
Experimental conditions| Panel name | GeneBridge 4 |
|---|---|
| Primer_f | ACCCACCATAGGAAACAAGAC |
| Primer_r | TGAAGTGTGGATGAGTCTGTG |
| PCR product length | 152 bp |
| PCR conditions | 95 °C 15 sec 62 °C 60 sec 30 cycles |