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Gene/Protein Characteristic Table for KIAA1611

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Product ID	ORK02042
Accession No	AB046831
Description	zinc finger protein 160, transcript variant 1
Clone name	fj12627
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4688 bp) Predicted protein sequence (813 aa)
HaloTag ORF Clone	FHC02042
Flexi ORF Clone	FXC02042
Source	Human fetal brain
Rouge ID	mKIAA1611 by Kazusa Mouse cDNA Project

Length: 4688 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Ensembl ContigView (Add our DAS server as a DAS source)

Length: 813 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

[ zoom out (x2) ]

Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR007087	252	275	PD000003	Zinc finger
	IPR007087	280	303	PD000003	Zinc finger
	IPR007087	308	331	PD000003	Zinc finger
	IPR007087	336	359	PD000003	Zinc finger
	IPR007087	364	387	PD000003	Zinc finger
	IPR007087	392	415	PD000003	Zinc finger
	IPR007087	420	443	PD000003	Zinc finger
	IPR007087	448	471	PD000003	Zinc finger
	IPR007087	476	499	PD000003	Zinc finger
	IPR007087	504	527	PD000003	Zinc finger
	IPR007087	532	555	PD000003	Zinc finger
	IPR007087	560	583	PD000003	Zinc finger
	IPR007087	588	611	PD000003	Zinc finger
	IPR007087	616	639	PD000003	Zinc finger
	IPR007087	644	667	PD000003	Zinc finger
	IPR007087	672	695	PD000003	Zinc finger
	IPR007087	700	723	PD000003	Zinc finger
	IPR007087	728	751	PD000003	Zinc finger
	IPR007087	756	779	PD000003	Zinc finger
	IPR007087	784	807	PD000003	Zinc finger
HMMPfam	IPR001909	3	43	PF01352	KRAB box
	IPR007087	252	274	PF00096	Zinc finger
	IPR007087	280	302	PF00096	Zinc finger
	IPR007087	308	330	PF00096	Zinc finger
	IPR007087	336	358	PF00096	Zinc finger
	IPR007087	364	386	PF00096	Zinc finger
	IPR007087	392	414	PF00096	Zinc finger
	IPR007087	420	442	PF00096	Zinc finger
	IPR007087	448	470	PF00096	Zinc finger
	IPR007087	476	498	PF00096	Zinc finger
	IPR007087	504	526	PF00096	Zinc finger
	IPR007087	532	554	PF00096	Zinc finger
	IPR007087	560	582	PF00096	Zinc finger
	IPR007087	588	610	PF00096	Zinc finger
	IPR007087	616	638	PF00096	Zinc finger
	IPR007087	644	666	PF00096	Zinc finger
	IPR007087	672	694	PF00096	Zinc finger
	IPR007087	700	722	PF00096	Zinc finger
	IPR007087	728	750	PF00096	Zinc finger
	IPR007087	756	778	PF00096	Zinc finger
	IPR007087	784	806	PF00096	Zinc finger
HMMSmart	IPR001909	3	63	SM00349	KRAB box
	IPR015880	252	274	SM00355	Zinc finger
	IPR015880	280	302	SM00355	Zinc finger
	IPR015880	308	330	SM00355	Zinc finger
	IPR015880	336	358	SM00355	Zinc finger
	IPR015880	364	386	SM00355	Zinc finger
	IPR015880	392	414	SM00355	Zinc finger
	IPR015880	420	442	SM00355	Zinc finger
	IPR015880	448	470	SM00355	Zinc finger
	IPR015880	476	498	SM00355	Zinc finger
	IPR015880	504	526	SM00355	Zinc finger
	IPR015880	532	554	SM00355	Zinc finger
	IPR015880	560	582	SM00355	Zinc finger
	IPR015880	588	610	SM00355	Zinc finger
	IPR015880	616	638	SM00355	Zinc finger
	IPR015880	644	666	SM00355	Zinc finger
	IPR015880	672	694	SM00355	Zinc finger
	IPR015880	700	722	SM00355	Zinc finger
	IPR015880	728	750	SM00355	Zinc finger
	IPR015880	756	778	SM00355	Zinc finger
	IPR015880	784	806	SM00355	Zinc finger
ProfileScan	IPR001909	3	74	PS50805	KRAB box
	IPR007087	252	279	PS50157	Zinc finger
	IPR007087	280	307	PS50157	Zinc finger
	IPR007087	308	335	PS50157	Zinc finger
	IPR007087	336	363	PS50157	Zinc finger
	IPR007087	364	391	PS50157	Zinc finger
	IPR007087	392	419	PS50157	Zinc finger
	IPR007087	420	447	PS50157	Zinc finger
	IPR007087	448	475	PS50157	Zinc finger
	IPR007087	476	503	PS50157	Zinc finger
	IPR007087	504	531	PS50157	Zinc finger
	IPR007087	532	559	PS50157	Zinc finger
	IPR007087	560	587	PS50157	Zinc finger
	IPR007087	588	615	PS50157	Zinc finger
	IPR007087	616	643	PS50157	Zinc finger
	IPR007087	644	671	PS50157	Zinc finger
	IPR007087	672	699	PS50157	Zinc finger
	IPR007087	700	727	PS50157	Zinc finger
	IPR007087	728	755	PS50157	Zinc finger
	IPR007087	756	783	PS50157	Zinc finger
	IPR007087	784	811	PS50157	Zinc finger
ScanRegExp	IPR007087	254	274	PS00028	Zinc finger
	IPR007087	282	302	PS00028	Zinc finger
	IPR007087	310	330	PS00028	Zinc finger
	IPR007087	338	358	PS00028	Zinc finger
	IPR007087	366	386	PS00028	Zinc finger
	IPR007087	394	414	PS00028	Zinc finger
	IPR007087	422	442	PS00028	Zinc finger
	IPR007087	450	470	PS00028	Zinc finger
	IPR007087	478	498	PS00028	Zinc finger
	IPR007087	506	526	PS00028	Zinc finger
	IPR007087	534	554	PS00028	Zinc finger
	IPR007087	562	582	PS00028	Zinc finger
	IPR007087	590	610	PS00028	Zinc finger
	IPR007087	618	638	PS00028	Zinc finger
	IPR007087	646	666	PS00028	Zinc finger
	IPR007087	674	694	PS00028	Zinc finger
	IPR007087	702	722	PS00028	Zinc finger
	IPR007087	730	750	PS00028	Zinc finger
	IPR007087	758	778	PS00028	Zinc finger
	IPR007087	786	806	PS00028	Zinc finger

RT-PCR-ELISA

Experimental conditions

Chromosome No. 19
Experimental conditions

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