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Order Kazusa clone(s) from : |
| Product ID | ORK04789 |
|---|---|
| Accession No | AB033058 |
| Description | discs, large homolog 3 (Drosophila) |
| Clone name | fh08445 |
| Vector information | |
| cDNA sequence | DNA sequence (5072 bp) Predicted protein sequence (520 aa) |
| Source | Human fetal brain |
| Rouge ID |
mKIAA1232
by Kazusa Mouse cDNA Project
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Length: 5072 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).
| N-terminal truncation | Coding interruption | |
|---|---|---|
| cloned DNA seq | No warning | No warning |
Integrity of 3' end
| Length of 3'UTR | 3218 bp |
|---|---|
| Genome contig ID | gi89161218f_69488880 |
| PolyA signal sequence (AATAAA,-22) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (153184 - 153233) |
----+----*----+----*----+----*----+----*----+----* |
Length: 520 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment)![]() |
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The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database
(FASTA output,
Multiple alignment)![]() |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR001452 | 176 | 234 | PD000066 | Src homology-3 |
| FPrintScan | IPR001452 | 175 | 185 | PR00452 | Src homology-3 |
| IPR001452 | 194 | 209 | PR00452 | Src homology-3 | |
| IPR001452 | 211 | 220 | PR00452 | Src homology-3 | |
| HMMPfam | IPR001478 | 57 | 135 | PF00595 | PDZ/DHR/GLGF |
| IPR001452 | 175 | 234 | PF00018 | Src homology-3 | |
| IPR008144 | 363 | 465 | PF00625 | Guanylate kinase | |
| HMMSmart | IPR001478 | 65 | 138 | SM00228 | PDZ/DHR/GLGF |
| IPR001452 | 175 | 241 | SM00326 | Src homology-3 | |
| IPR008145 | 329 | 508 | SM00072 | Guanylate kinase/L-type calcium channel region | |
| ProfileScan | IPR001478 | 57 | 138 | PS50106 | PDZ/DHR/GLGF |
| IPR001452 | 172 | 242 | PS50002 | Src homology-3 | |
| IPR008144 | 330 | 505 | PS50052 | Guanylate kinase | |
| ScanRegExp | IPR008144 | 362 | 379 | PS00856 | Guanylate kinase |
Chromosome No. X
Experimental conditions| Panel name | GeneBridge 4 |
|---|---|
| Primer_f | AAGAACATTCAGCCCCAGCAC |
| Primer_r | GCAGTGTTAAGGGTGTGTCTC |
| PCR product length | 76 bp |
| PCR conditions | 95 °C 15 sec 64 °C 60 sec 30 cycles |