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Gene/Protein Characteristic Table for FLJ00411

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Product ID	ORK06828
Accession No	AK122586
Clone name	sf00010
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (7855 bp) Predicted protein sequence (437 aa)
Source	Human spleen

Length: 7855 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 437 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR007110	131	184	PF00047	Immunoglobulin-like
	IPR007110	220	291	PF00047	Immunoglobulin-like
	IPR007110	322	373	PF00047	Immunoglobulin-like
HMMSmart	IPR003599	24	114	SM00409	Immunoglobulin subtype
	IPR003598	30	105	SM00408	Immunoglobulin C-2 type
	IPR003599	123	203	SM00409	Immunoglobulin subtype
	IPR003598	129	189	SM00408	Immunoglobulin C-2 type
	IPR003599	212	307	SM00409	Immunoglobulin subtype
	IPR003598	218	296	SM00408	Immunoglobulin C-2 type
	IPR003599	314	391	SM00409	Immunoglobulin subtype
ProfileScan	IPR007110	21	116	PS50835	Immunoglobulin-like
	IPR007110	120	199	PS50835	Immunoglobulin-like
	IPR007110	206	310	PS50835	Immunoglobulin-like
	IPR007110	307	387	PS50835	Immunoglobulin-like

Experimental conditions

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