Gene/Protein Characteristic Table for FLJ00411
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Product ID ORK06828
Accession No AK122586
Clone name sf00010
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (7855 bp)
Predicted protein sequence (437 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 7855 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Features of the protein sequence
Description

Length: 437 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC56927 3e-175 100.0 FLJ00411 protei...
Homo sapiens
AAI41885 3.1e-146 100.0 SIGLEC1 protein...
Homo sapiens
EAX10518 6.2e-146 99.7 sialic acid bin...
Homo sapiens
EAX10517 6.4e-146 99.7 sialic acid bin...
Homo sapiens
BAB15752 2.4e-145 99.5 FLJ00055 protei...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AK024462 1.6e-129 99.5 FLJ00055
AK024459 3.3e-08 36.1 FLJ00051
AK024479 3.3e-08 36.1 FLJ00073
AB018299 1.1e-05 25.3 KIAA0756
AB040929 0.00044 23.6 KIAA1496
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR007110 131 184 PF00047 Immunoglobulin-like
IPR007110 220 291 PF00047 Immunoglobulin-like
IPR007110 322 373 PF00047 Immunoglobulin-like
HMMSmart IPR003599 24 114 SM00409 Immunoglobulin subtype
IPR003598 30 105 SM00408 Immunoglobulin C-2 type
IPR003599 123 203 SM00409 Immunoglobulin subtype
IPR003598 129 189 SM00408 Immunoglobulin C-2 type
IPR003599 212 307 SM00409 Immunoglobulin subtype
IPR003598 218 296 SM00408 Immunoglobulin C-2 type
IPR003599 314 391 SM00409 Immunoglobulin subtype
ProfileScan IPR007110 21 116 PS50835 Immunoglobulin-like
IPR007110 120 199 PS50835 Immunoglobulin-like
IPR007110 206 310 PS50835 Immunoglobulin-like
IPR007110 307 387 PS50835 Immunoglobulin-like
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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